| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1400 |
|---|
| Symbol | |
|---|
| ID | 3103620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1487596 |
|---|
| End bp | 1488255 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637170575 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_113858 |
|---|
| Protein GI | 53804284 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAC AGGTGGACAA GTGGGTCGTA AGCGCCGGTG AAAGACTGGA TATCTTGACA
GGTGTGGACC TGGCGATCAA ACCGGGTGAG AGCGTCGGGA TCGTCGGAAC CTCCGGCTCC
GGCAAGTCGA CTCTGCTCGG TCTGCTCGCC GGCCTCGACC GACCGTCTGC GGGCGAGATC
GAGCTTGCCG GCTGCCGCCT TTCGCAACTG GACGAAGATG GTTTGGCACG GCTGAGGGCG
CGGCACGTCG GTTTCGTGTT CCAGTCGTTC CAGCTTCTGC CCAGCTTCAC CGCCCTGGAA
AATGTCATGC TGCCGCTGGA ACTCGGCGGT CGTCTCGACG AAGCCCGGGA CCGCGCCCGG
GGACTCTTGG CCCGGGTCGG CCTCCAGCAT CGCCTGGGGC ATTATCCCCG CCAGCTCTCC
GGCGGGGAGC AGCAGCGAGT GGCCCTTGCG CGCGCCTTCG TCACGGTGCC GGACATCCTC
TTCGCCGACG AGCCGACCGG AAATCTCGAC GACCGTACCA GCCAGACCAT CATCGATATG
CTGTTCGACC TCAACCGCGA GCATCGCACC ACGCTGGTCC TGGTGACGCA CGATGCCCGT
CTCGCTTCGC GTTGTGATCG CCTGCTCCGG CTGGAGGCCG GGCGGATGCT CGAGTCATGA
|
|---|
| Protein sequence | MARQVDKWVV SAGERLDILT GVDLAIKPGE SVGIVGTSGS GKSTLLGLLA GLDRPSAGEI
ELAGCRLSQL DEDGLARLRA RHVGFVFQSF QLLPSFTALE NVMLPLELGG RLDEARDRAR
GLLARVGLQH RLGHYPRQLS GGEQQRVALA RAFVTVPDIL FADEPTGNLD DRTSQTIIDM
LFDLNREHRT TLVLVTHDAR LASRCDRLLR LEAGRMLES
|
|---|
| |