| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1362 |
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| Symbol | |
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| ID | 3104767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1450622 |
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| End bp | 1452298 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170540 |
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| Product | outer membrane efflux family protein |
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| Protein accession | YP_113823 |
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| Protein GI | 53804520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGACA GCCGTCATGG CATGTTCCGA CGCGCGGCCG GCGAAACACG CCCCCACCAG
GACCTTCAAT GCAGGATTCC GTACAGGATG GAGCCCAGAA TCGATCTGTT GAAAAACGCC
GGATGCCAGC TGCTTCTGAT CATTCCGGCG GTACTCGCCG GCGGTTGCAG CACGAAGATC
GGTCCGGATT ACCAGACTCC CGAAACCCGG GTTTCCCCCG ACTGGCTCGA AAGCGAGGAC
AGGCGTGTCT CCAGGAAGGA GGGCGATTTC CGTGAGTGGT GGCGGGTGTT CAAGGATCCG
GTCCTGAACA AGCTGGTGGA AACCGCCTAT TCACAGAACC TTCCGCTACA GATCGCCGCC
GTCCGCATCC TGGGTTCGCG CGCGGAGCTG GGCATCGCGA CCGGCAATCT GTTCCCGCAG
AGCCAGGCGT TCCAAGGCCA AACCGAAGAT TTCGGCATGC CTCTTCTGCG GAATCTGGGA
TTGGGCGACA GCCTCTGGTA TACCCGCATC GGCGTCATGT CGAACTGGGA AATCGACATC
TGGGGCAAGT ACCGCCGGGC CATCGAATCG GCCGACGCGC AGTTGATGGC ATCCGTCGCC
GAGTACGACG ACATCCTCGT CACCCTCACC GCCGACGTGG CCAACACCTA TGTGCAGATC
CGGACCCTGG AAAAGCGCCT GGATATCGCC CGCCATAACG TCGAGACCCA GAGCGAGAGC
CTGCGCATCG CCGACGCCAA ATTCCACGGC GGCACCAGCA CCCAGCGCGA CGTGGAACAG
GCCAGGACCG TGCTCGCCAG CACCCAGGCC ACCATTCCGG TACTGGAAGG GCAGCTTCGG
CAGGCAAAAA ACACGCTTTG CTACTTGCTC GGCATGACGC CGGAGAAGCT GGACGAGCCC
CTGGGCGGCG AAGCGCAGTT CGGTCAAATT CCGGCGCCGC CGGTCCAGGT CGCCGTCGGC
ATTCCCGCCG ACCTGCTGCG CCGCCGCCCG GACGTGCGCC GTGCGGAACG GAGTGCCGCG
GCGCAATCGG CCCGCATCGG CATCGCCAAG GCGTCGCTCT ATCCGGCCTT CTCGATCAGC
GGCAGCTTCG GCTTCATTGC CACCAACTCC CAGGGCCACA GCCTGAGCGA TATCTTCAAC
TGGGGCCAGC ACTACTACGC GTTCGGGCCC TCGGTGCAGT GGAACCTGTT CAATTATGGC
CAGCTCACCA ACCAGGTCCG CGCCCAGGAT GCCCGCTTCC AGGAGCTGGC CCTGAGTTAT
CAGAACACCG TGCTGAAGGC GCAGCAGGAG GCCGAGAGCG CCTTGATCGG TTTCCTCAAG
GCCCAGAATT CCGCACAGTT CCTGGCCGAG AGCACCGCCG CCGCCCAGCG CTCGCTGGAT
CTGGCAACCT TGCAGTATCG CGAAGGCATC ACCGATTTCA CCACGGTACT CACGGCGGAG
CAGGACTTGC TGAAACAGCA GGACAATTTC GCCCAGACCC TCGGCAACAT CGCCACCAAC
CTGGTCGGCG TCTACCGCAC TCTGGGCGGC GGCTGGCAGA TTCGCGAAGG CAAGGAATTC
GTGCCCGAGC CGATCCTGCA AGCGATGGCC GAGCGAACCC ACTGGGGCGA TCTGCTGAAG
CCCGGGGCGG TGCCCAAGAC TCCCCCGTCC AGCCTCATCC GGGCGCCGGA CTGGTAA
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| Protein sequence | MLDSRHGMFR RAAGETRPHQ DLQCRIPYRM EPRIDLLKNA GCQLLLIIPA VLAGGCSTKI
GPDYQTPETR VSPDWLESED RRVSRKEGDF REWWRVFKDP VLNKLVETAY SQNLPLQIAA
VRILGSRAEL GIATGNLFPQ SQAFQGQTED FGMPLLRNLG LGDSLWYTRI GVMSNWEIDI
WGKYRRAIES ADAQLMASVA EYDDILVTLT ADVANTYVQI RTLEKRLDIA RHNVETQSES
LRIADAKFHG GTSTQRDVEQ ARTVLASTQA TIPVLEGQLR QAKNTLCYLL GMTPEKLDEP
LGGEAQFGQI PAPPVQVAVG IPADLLRRRP DVRRAERSAA AQSARIGIAK ASLYPAFSIS
GSFGFIATNS QGHSLSDIFN WGQHYYAFGP SVQWNLFNYG QLTNQVRAQD ARFQELALSY
QNTVLKAQQE AESALIGFLK AQNSAQFLAE STAAAQRSLD LATLQYREGI TDFTTVLTAE
QDLLKQQDNF AQTLGNIATN LVGVYRTLGG GWQIREGKEF VPEPILQAMA ERTHWGDLLK
PGAVPKTPPS SLIRAPDW
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