| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1316 |
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| Symbol | nusA |
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| ID | 3102698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1406517 |
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| End bp | 1408016 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637170494 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_113778 |
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| Protein GI | 53804603 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAATA AAGAAATCCT GCTGGTAGTC GACGTGGTGT CGAACGAAAA GGACATCGAA
AAAGAAGTCA TCTTTTCCGC GATCGAAGAG GCGCTCCGCA CCGCCACGAT CAAGCGGCAT
GACGGCAGGT ACGATGTGCG CGTGAGTATC GACCGCAAGA CCGGCGACTA CGAAACCTTC
CGCCGCTGGC AGGTGGTGGA ACCCCGGGAG GAATTCGGCA ACGGTGTCGA ATTCCCGGAA
AGAGAGATAT CCCTCGAAGA AGCGCGCAAG ACTCACCCCG GCATCACCGT CGGCGAGTTC
GTAGAAGAAC CCTTCGACTC CATCGAGTTC GGCCGCATCG CCGCGCAGAC CGCCAAGCAG
GTGATCGTGC AGAAAGTGCG CGAGGCCGAA CGGCGCAAGA TCGCGGACGC CTATCAGAGC
CGCGTCGGCG AGCTGGTCAC CGGCGTCATC AAGCGCATCG AGCGGGGCAA TGTCTTCCTC
GACCTCGGCG GCAACGTCGA GGCCTTCATC CCTCGTGACG AGATGATCCC GCGCGAATCC
GTCCGTTCCG GGGACCGCCT GCGCGGCATC CTCAGCGCGG TCCGGCCGGA TGCCAGGGGG
CCGCAGCTTT TCGTCAGCCG CACCGCGCCG GAACTCCTGA TCGCGCTATT CCGGCTGGAA
GTCCCCGAGG TCAGTGAAAA CCTCATCGAA ATCAAGGGAG CAGCCCGCGA TCCCGGAGTA
CGCGCCAAAG TGGCGGTCAA GAGCAACGAC CCCCGCCTCG ACCCGGTCGG CGCCTGCGTC
GGCATGCGCG GCTCGCGGGT CCAAGCCGTG TCCAACGAAC TGGCGGGAGA ACGCATCGAC
ATCATCCTGT GGAACGAGAA CGAGGCCCAG TTCGTGGTCA ACGCCATGTC GCCAGCCGAA
ATCGTTTCCA TCGTCGTGGA CGAAGACCGC CACAGCATGG ATATTGCCGT CGCCGACGAA
AACCTGTCGC AGGCCATCGG CCGCGGCGGT CAGAACGTGC GGCTGGCGTC CGAGCTTACC
GGCTGGACGC TTAACGTCAT GAGTTCCACC CAGGCCGACG CCAAGACCCA GGAAGAAACC
CGGCGTCTGA TCCAAACCTT CGTCGAACAA CTCGGCGTCG ATGGGGAGGT CGCGGAAATC
CTCGTCCGGG AAGGCTTCTC CAGCGTGGAA GAACTCGCCT ACGTACCGAC CAAGGAATTG
CTCGAAATCG AGGAATTCGA CGAGGATATC GTGGAAGAAT TGCGTAACCG GGCACGGGAT
GCGCTGCTCA TCAAGGCCAT CGCATCCGAG GAGAAACTCG AAGAGGTCGA GCCCAGCGAG
GATCTGCTGG AGCTCGAAGG CATGGATCGC GAATTGGCCT ATCGCCTCGC GCGCCATGGC
ATTCGCACGC TGGAAGACTT GGCCGACCAG GCCGTCCCGG ATCTTTTGGA CATCGAAGAC
ATGGAAGAGG AAAAGGCCGC TGAACTCATC ATGAAGGCGC GCGCCTCGTG GTTTTCCTGA
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| Protein sequence | MANKEILLVV DVVSNEKDIE KEVIFSAIEE ALRTATIKRH DGRYDVRVSI DRKTGDYETF
RRWQVVEPRE EFGNGVEFPE REISLEEARK THPGITVGEF VEEPFDSIEF GRIAAQTAKQ
VIVQKVREAE RRKIADAYQS RVGELVTGVI KRIERGNVFL DLGGNVEAFI PRDEMIPRES
VRSGDRLRGI LSAVRPDARG PQLFVSRTAP ELLIALFRLE VPEVSENLIE IKGAARDPGV
RAKVAVKSND PRLDPVGACV GMRGSRVQAV SNELAGERID IILWNENEAQ FVVNAMSPAE
IVSIVVDEDR HSMDIAVADE NLSQAIGRGG QNVRLASELT GWTLNVMSST QADAKTQEET
RRLIQTFVEQ LGVDGEVAEI LVREGFSSVE ELAYVPTKEL LEIEEFDEDI VEELRNRARD
ALLIKAIASE EKLEEVEPSE DLLELEGMDR ELAYRLARHG IRTLEDLADQ AVPDLLDIED
MEEEKAAELI MKARASWFS
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