Gene MCA1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1294 
SymbolmurF 
ID3103100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1379715 
End bp1381064 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content67% 
IMG OID637170472 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_113756 
Protein GI53804641 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG GCGAACTCGC AAAGCATGTT CCTGGCGCCA AACTGAGCGG CGATGCCGAA 
ACCAGCTTCG ACGGCGTCTC GACCGACACC CGTGCCATCC GCCCCGGCTC GCTGTTCTTT
GCCCTGCGGG GAGACCGCTT CGATGCCCAT GACTTCATCG CCGATGCAGT GGGTGGAGGG
GCTGCGGCGC TGGTCGTGGA GCGGCGGATC GACACCCCCC TGCCGCAGAT CATCGTCCCC
GATGGTCGCA GAGCGCTGGG TGCCGCCGCA GCCGCCTGGC GCGCTCAGTT CGACGTGCCG
CTGATCGCGG TCGCCGGCAG CAACGGCAAG ACCACCGTCA CCCAGATGAT CGCCGCCATT
CTGGCGGCCG CATTCGGCGA GGAGCGCCGC CTGGCGACCC GCGGCAATCT CAACAATGAC
GTCGGGCTGC CCTTGATGCT GTTCGAACTG AAAGCCGGCC ACCGCATCGC CGTACTCGAA
CTCGGCATGA ATCATCCGGG CGAAATCGCC TACCTCGCGA ATCTTGCCCG ACCCACCGTG
GCGCTGGTGA CCAACGCCCA GCGCGAACAC CAGGAATTCA TGGCCAGCGT GGAAGCCACG
GCCCACGAGA ACGGATCGGT GATCGCGGCA TTGCCGACCG ATGGTACCGC CGTGTTCCCC
GCGGATGACC CCTGTGCCGG CATCTGGCGG AAACTGGCGG GAACGCGCCG GGTAATCGAT
TTCGCACGCC GCGGAACAGC GACGGTCAGC GGGACATTCC GGACCAGCGC AGGTTTCGCC
GAAGTTTCGA TCACGACTCC CGCCGGCTGC TGGCAAGCCA ATCTCCCGCT TGCCGGTGAA
CACAACGTCC ACAACGCGCT GGCTGCAACG GCGGCTGCGC TGGCGGCTGG CGTGCCTCCC
GAGGCCATAC GGCGAGGTCT GGAATCCTTT CGCCCCGTCG CCGGCCGCGG CGTCCAGCTG
CGCACGCGAA CCGGCGCGAG ACTGATCGAC GACACCTACA ATGCCAACCC CGATTCCGTC
CGGGCGGCGA TCGACGTGCT CGCCGGCTTT CCGCAGCCGC GCATCCTGGC GCTGGGCGAC
ATGGGGGAAG TCGGTGTCCA TGGCCCGGAA TTTCACCGTG AAATCGGCCG CTATGCGCGC
GAGCGCGACA TCGACACCCT GCTCGCTCTG GGCGAACTGT CCTCCGAAAC GGTCCGGACC
TTCGGCACCA GCGGCCACCA CTTTGGCACC ATGGACGAGC TCATCGCGGC GCTGGCGTCC
GCCGACCGTC CGGAGGCCAC GCTGCTGGTC AAGGGCTCGC GCTTCATGCA GATGGAGCGC
GCCGTCAAGG CTCTGGCGAA ACCGGAATGA
 
Protein sequence
MNLGELAKHV PGAKLSGDAE TSFDGVSTDT RAIRPGSLFF ALRGDRFDAH DFIADAVGGG 
AAALVVERRI DTPLPQIIVP DGRRALGAAA AAWRAQFDVP LIAVAGSNGK TTVTQMIAAI
LAAAFGEERR LATRGNLNND VGLPLMLFEL KAGHRIAVLE LGMNHPGEIA YLANLARPTV
ALVTNAQREH QEFMASVEAT AHENGSVIAA LPTDGTAVFP ADDPCAGIWR KLAGTRRVID
FARRGTATVS GTFRTSAGFA EVSITTPAGC WQANLPLAGE HNVHNALAAT AAALAAGVPP
EAIRRGLESF RPVAGRGVQL RTRTGARLID DTYNANPDSV RAAIDVLAGF PQPRILALGD
MGEVGVHGPE FHREIGRYAR ERDIDTLLAL GELSSETVRT FGTSGHHFGT MDELIAALAS
ADRPEATLLV KGSRFMQMER AVKALAKPE