Gene MCA1253 details

Gene Information

• Locus tag: MCA1253
• Symbol: prlC
• ID: 3104821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1334611
• End bp: 1336659
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170432
• Product: oligopeptidase A
• Protein accession: YP_113716
• Protein GI: 53804411
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0339] Zn-dependent oligopeptidases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAACC CTTTGCTGGA GGACCACGAA CTACCGCCGT TCTCGCGCAT CGAAGCGAGC 
CATGTGTTGC CGGCGGTCCG ACAAATCCTG GCCGAAAGCC GGGCCGCGGT GGACGCCTTG 
CTCCAACGCG GTGGGCCCTA TACCTGGGCC GGGCTGGTGG AACCCCTGGA CGATCTCGAC 
GACCGACTGA ACAAGGCCTG GTCGCCGGTC GCTCATCTGA ACGCCGTGAT GAACAGCGAG 
GCGTTGAGGG ATGCCTACAA CGCCGCTCTG CCGCTCTTGA GCGAATATGC CACCGAGATG 
GGCCAGAATG CGGGGCTGTA CGCCGCTTTC CGGGAAATCG CCGAAGGCAT CGAGTACGCC 
CGCCTGGACA CCGCCCAGCG CAAGATCGTC GACAATGCGC TGCGCGACTT CCGCCTATCC 
GGTGTGGCCC TGGAAGGGAA GCAGAGGGCG CGTTTCAAGG AAATCGCCCA GGAGTTGTCG 
CGCTTGGGCA GCCGGTTTTC GGACAACGTG CTCGATGCCA CCCAGGGCTG GACGCGGCAT 
ATCGACGACG AGGCACTCTT GGCAGGACTG CCTGAAACCG ACCGGGCGGT GGCCCGCCAG 
GCCGCGGAAG CCGAAGGCAA GAGCGGCTGG GTGTTCGGTC TCGCTTTCCC TTCCTATGTC 
GCCATCATGA CTCATGCCGA TGACAGGGGG CTGCGGGAGG AGTTCTATCG GGCCTACGTG 
ACCCGCGCGT CCGAAACCGG CCCCCACGGC GGGCGTTGGG ACAACGGCGA AGTGATGGAG 
AAGATCCTGG CTCTGCGTCA CGAAGAGGCG AGGCTCCTGG GTTTTGCCAA TTATGCCGAG 
CTATCTCTGG CCACCAAGAT GGCGGAGAGT CCCGAACAGG TGCTGGGTTT TCTGAATGAT 
CTGGCGGAAA AGGCGCTACC CGTCGCCCGC TGCGACCTGG AGGAGTTGAA GGCATTTGCA 
TGCGAGAACC ACGGGCTCGA CGAGTTGCAG GCCTGGGACG TGGCGTACTA TTCCGAAAAG 
CTCCGCGAGC ACAAATACGC GTTTTCGGAG GAGGAGGTAA AAGCCTATTT TCCTGCAGAG 
CGCGCGGTTT CCGGTCTGTT CGCGGTGGTG CAGCGGCTGT ACGGCCTGGA AATCAGGCGG 
CGCGAAGACA TCGACGTCTG GCATCCGGAC GTCCGCTATT ACGAGATATT CGACCGGACC 
GGCGAACGGC GGGGCGGCTT CTATCTGGAT CTCTATGCAC GCCCCGGCAA GCGCAGCGGC 
GCCTGGATGG ACGAATGCAT CAGCCGGCGC CGTGTCGGCG GCGCCATTCA GACGCCGGTC 
GCCTATCTGA CCTGTAATTT CACGCCGCCC GCGGGTGACG AGCCGGCGCT GCTGCGGCAC 
GACGACGTGG TGACGCTGTT CCATGAATTC GGCCACGGCT TGCACCATCT GCTCACCAAG 
GTCGAACATC TCGGTGTGTC GGGAATCCGC GGGGTGGAAT GGGATGCGGT AGAACTGCCG 
AGCCAGTTCA TGGAGAACTT CTGCTGGGAG CGCGAGGCGC TGGCCCTGAT CTCCGGCCAT 
TACCGGACCG GCGAGCCTCT GCCGGACGAA CTGCTGGCCC GGATGTTGGC GGCGAAAAAC 
TTCCAGGCCG GCATGCAGAC GGTCCGTCAA CTGGAGTTCG CCCTGCTGGA TTTCCGCATT 
CATCACGAAT ACGATCCAGC CCGAGGCGGG CGCGTCTATG AAATCCTCGA GGATGTGCGG 
CGACGAGTAT CGGTCATGCC GCCTCCGGCG TACAACCGCT TTCCCCACAG TTTTCAGCAC 
ATCTTCGGCG GCGGCTATGC GGCCGGCTAT TACAGTTACA AGTGGGCGGA AGTCCTGTCG 
AGCGATGCCT TTTCGCTGTT CGAGGAGCGT GGCATCTTCG ATCCGGAGAC CGGCCATGCT 
TTCCTGAGCA ACGTGCTGGA ACAGGGCGGA CGTCGGAGTG CCCTGGAGTC TTTCATCGCC 
TTCCGCGGCC GCGAACCGGA CATCGAGGCT TTGCTGCGCC ACAGTGGGAT GCTCGTATCC 
GCCGGCTGA 

 

Protein sequence

MTNPLLEDHE LPPFSRIEAS HVLPAVRQIL AESRAAVDAL LQRGGPYTWA GLVEPLDDLD 
DRLNKAWSPV AHLNAVMNSE ALRDAYNAAL PLLSEYATEM GQNAGLYAAF REIAEGIEYA 
RLDTAQRKIV DNALRDFRLS GVALEGKQRA RFKEIAQELS RLGSRFSDNV LDATQGWTRH 
IDDEALLAGL PETDRAVARQ AAEAEGKSGW VFGLAFPSYV AIMTHADDRG LREEFYRAYV 
TRASETGPHG GRWDNGEVME KILALRHEEA RLLGFANYAE LSLATKMAES PEQVLGFLND 
LAEKALPVAR CDLEELKAFA CENHGLDELQ AWDVAYYSEK LREHKYAFSE EEVKAYFPAE 
RAVSGLFAVV QRLYGLEIRR REDIDVWHPD VRYYEIFDRT GERRGGFYLD LYARPGKRSG 
AWMDECISRR RVGGAIQTPV AYLTCNFTPP AGDEPALLRH DDVVTLFHEF GHGLHHLLTK 
VEHLGVSGIR GVEWDAVELP SQFMENFCWE REALALISGH YRTGEPLPDE LLARMLAAKN 
FQAGMQTVRQ LEFALLDFRI HHEYDPARGG RVYEILEDVR RRVSVMPPPA YNRFPHSFQH 
IFGGGYAAGY YSYKWAEVLS SDAFSLFEER GIFDPETGHA FLSNVLEQGG RRSALESFIA 
FRGREPDIEA LLRHSGMLVS AG