Gene MCA1226 details

Gene Information

• Locus tag: MCA1226
• Symbol: tolQ
• ID: 3102365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1292731
• End bp: 1293408
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170404
• Product: tolQ protein
• Protein accession: YP_113690
• Protein GI: 53804467
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins
• TIGRFAM ID: [TIGR02796] TolQ protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.369592
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCTG AGCTGTCGAT CATTACTCTG ATCAAGGAGG CCAGCCCGGT CGTCCAGATC 
GTCATGTTCA TTCTGGTCGC GGCGTCCGTG ATCTCTTGGA CATTCATTTT CGGCAAGTAC 
CGCGAGATCC GGCGCGCCGA ACAGACCTCC ATCGCTTTCG AAGACCGTTT CTGGTCCGGC 
ATCGACCTGG CCGACCTGTA CCGCCAACTG GCCACGGAAA GCGACGACTG TGGCGGCCTG 
GAGCTCATCT TTCTGGCGGG CTTCAAGGAG TTCGGCCGCC TGCGGCAGCA GAGCGGCATC 
ATGCCGGAAG CCGTGATGGA GGGAACCCAG CGCGCCATGC GGGTAGCGCT CAACCGCGAG 
CTGGACAAGC TGGACGAAAG GCTGCCGTTC TTGGCCACCG TGGGGTCGAC CAGCCCGTAC 
ATCGGCCTGT TCGGTACCGT GTGGGGCATC ATGAACTCCT TCCGCTCGCT CGGCTCGGTC 
AAGCAGGCGA CCCTGGCGAT GGTGGCGCCG GGCATCTCCG AGGCACTGGT AGCGACGGCG 
ATGGGGCTGT TCGCGGCGAT TCCGGCGGTG ATCGCATACA ACCGGTATTC GACCAACATT 
TCCCGGCTGG CGAACCGCTA CGAGTCCTTC ACCGAGGAAC TGCTGAGCCT GCTGCACCGG 
CAGGCGCACA CCAAATGA 

 

Protein sequence

MNSELSIITL IKEASPVVQI VMFILVAASV ISWTFIFGKY REIRRAEQTS IAFEDRFWSG 
IDLADLYRQL ATESDDCGGL ELIFLAGFKE FGRLRQQSGI MPEAVMEGTQ RAMRVALNRE 
LDKLDERLPF LATVGSTSPY IGLFGTVWGI MNSFRSLGSV KQATLAMVAP GISEALVATA 
MGLFAAIPAV IAYNRYSTNI SRLANRYESF TEELLSLLHR QAHTK