Gene MCA1223 details

Gene Information

• Locus tag: MCA1223
• Symbol: ruvB
• ID: 3102544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1287923
• End bp: 1288960
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637170401
• Product: Holliday junction DNA helicase RuvB
• Protein accession: YP_113687
• Protein GI: 53804470
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2255] Holliday junction resolvasome, helicase subunit
• TIGRFAM ID: [TIGR00635] Holliday junction DNA helicase, RuvB subunit

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.15164
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGACGC AGCGGCTGGT GAGCGCGGCG GGCCAGTGGG ACGAGGAGGC GATCGACCGC 
GCCATCCGGC CCAAGCGCCT GGAGGATTAC GTCGGCCAGC GCGCGATGCG CGAGCAGATG 
GCGATCTTCA TCCAGGCGGC GTTGGGGCGC GGCGAGGCGC TGGATCACGT CCTGATCTTC 
GGCCCGCCGG GGCTGGGCAA GACCACGCTG GCCAACATCA TCGCCAACGA GCTGGGCGTC 
AATGTCCGCC ATACATCCGG GCCGGTGCTG GAGAAGGCCG GCGATCTGGC GGCGCTGTTG 
ACCAACCTCG AACCGCGTGA CGTGCTGTTC ATCGATGAAA TCCATCGACT CGGCGCCGTG 
GTGGAAGAGG TGCTGTACCC CGCGATGGAG GATTACCAGA TCGACATCAT GATCGGCGAA 
GGCCCCGCCG CCCGTTCGAT CAAGCTCGAT CTGCCGCCGT TCACGCTGGT CGGCGCCACC 
ACCCGCGCCG GGCTCCTGAC ATCGCCGCTG CGCGACCGTT TCGGCATCGT GCACCGGCTG 
GAATTCTACA GCGTCGAAGA GTTGAGCAGG ATCGTCGCCC GCTCGGCCCG TATCTTGGGC 
AGCGAGATCA CGCCGGAGGG CGCGGCGGAG GTGGCGCGCC GTTCCCGCGG CACCCCCCGT 
ATCGCCAACC GCCTGCTGCG GCGGGTCCGC GACTTCGCCC AGGTCATGGC CGACGGGCGG 
ATCACCGGTG AAGTGGCCGG GAAGGCGCTG GAAATGCTCG ACGTGGACCC GAACGGCTTC 
GATCAGTCGG ACCGCCGTCT GCTGCTGACG ATGATGGAAA AATTCGAAGG CGGCCCGGTC 
GGCCTGGACA ATCTGGCCGC GGCGATCGGC GAGGAGCGCG GCACCATCGA GGACGTGCTG 
GAGCCCTATC TGATCCAGCA GGGCTTCATC ATGCGGACGC CCCGCGGCCG CGTCGCCACG 
CGCAACGCCT ATCTCCATTT CGGGCTGAAG CCGCCGCAGA GGACGAATGT CAACGAGGAA 
CTGTTCGGCG ATGAGTGA 

 

Protein sequence

MTTQRLVSAA GQWDEEAIDR AIRPKRLEDY VGQRAMREQM AIFIQAALGR GEALDHVLIF 
GPPGLGKTTL ANIIANELGV NVRHTSGPVL EKAGDLAALL TNLEPRDVLF IDEIHRLGAV 
VEEVLYPAME DYQIDIMIGE GPAARSIKLD LPPFTLVGAT TRAGLLTSPL RDRFGIVHRL 
EFYSVEELSR IVARSARILG SEITPEGAAE VARRSRGTPR IANRLLRRVR DFAQVMADGR 
ITGEVAGKAL EMLDVDPNGF DQSDRRLLLT MMEKFEGGPV GLDNLAAAIG EERGTIEDVL 
EPYLIQQGFI MRTPRGRVAT RNAYLHFGLK PPQRTNVNEE LFGDE