Gene MCA1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1139 
Symbol 
ID3104658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1195354 
End bp1196820 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content66% 
IMG OID637170324 
Producthydrogenase 4 subunit F 
Protein accessionYP_113609 
Protein GI53804772 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0485021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGG TCTACTGGAT TCTGGGCATC CCATTCGCCG GGATGCTCTA TCAGGCCTGG 
CGCGGCGATG CGCCTCAGGC CGGGCGGCTC AACACCCGCT TGTGCGGCCT GGTGTTCCTG
GCTTCGCTGG TGCTGGCGGC CACGGTATTG CGCCAGGGCA CCATCGAACT GGCGGACCTG
CAATTCCGCG TCGATGCCTT CAATGTCTAC CTGATCGTGC TGACCGCCTT CGTCGGAACC
ACCACGGCGA TGTTCTCCGC GCCCTACATG GCCAACGAGC GTGAACACGG GCGGGTGAAC
GCCGCGCGCA TGCGGCTCTA CCACGCCATG TACCAGGGCT TCATGTTGAC CATGTACCTG
GTGCTGACCA CCAACAACCT GGGGTTGATG TGGGTGGCGA TGGAAGGCGC GACCCTGGCC
ACGGTGCTGC TGGTCAGCCT GTACCGCTCC CCGGAGTCGA TCGAAGCGGC GTGGAAATAC
TTCATCCTGT GCGGCGTCGG CATCGCCCAG GCGCTTTTCG GCACGGTGCT GCTCTATTTC
GCCGCGGGCC AGGTGGAAGG AATGGGCGAG TATGGCCTGC AATGGTCGGT GCTCCATGCC
CATGCCGCCG AACTCAATCC CACGGTCATG AGCATCGCCT TCGTTTTCCT GCTGGTTGGA
TACGGTACCA AGATCGGGCT GGTGCCTCTG CACAACTGGC TGCCGGACGC CCACTCCGAA
GGTCCGACCC CCATGTCGGC CATCCTCTCC GGCCTGCTGT TGAACGACGC GCTGTATGCG
GTGGTGCGCT CCAAGATGCT GGTGGACGGT TCCCTGCAAA GCCAGCTCGC CGGCCACCTG
ATGATGGGCT TCGGCCTGCT GTCGTTCCTG GTCGCGGCAC TGTTCCTGCA CCGCCAGCGC
GACATCAAGC GGCTGTTCAG CTACTCCTCG ATCGAACACA TGGGCATCAT GACCTTCGCC
TTCGGCCTGG GTGGCCCGCT GGCCACCTTC GCGGCGCTGA TGCACATGAC GGTGCACTCG
CTCACCAAGT CGGCGATATT CGTCACCGTC GGCCATGCCG CCCAGATCAC CCGCACCCAG
CGGATCGAGC ACATCCGCGG CCTGCTGCGG ACCCAGCCGA TGGTCGGCTG GGGGTTGGTG
CTGGGGGTGG TGGCGATCGC GGGAATGCCG CCGTTCGGCG TCTTCACCAG CGAATTCCTG
GTGCTCACCG CCACCATGCA GGAATTTCCC TGGCTGACGC CGCTCCTGCT GCTGGGGATC
GCCATCGCCT TCGCCGGGCT GTTCCGCCAT CTGCACCCCA TGGCCTATGG CCCCCGACCG
GCAGGACAGG CGCCGGTGCA GGCCAACCTC TGGCCGGTGA TGGCCCATCT CGGCATCGTC
CTCTGGCTGG GGCTCGCGAT TCCGGGCGTG CTGGCCGACT GGTTCAGCCA GGCCACGCGG
CTCATAGCCG GGAGCGCGCC GCTATGA
 
Protein sequence
MSAVYWILGI PFAGMLYQAW RGDAPQAGRL NTRLCGLVFL ASLVLAATVL RQGTIELADL 
QFRVDAFNVY LIVLTAFVGT TTAMFSAPYM ANEREHGRVN AARMRLYHAM YQGFMLTMYL
VLTTNNLGLM WVAMEGATLA TVLLVSLYRS PESIEAAWKY FILCGVGIAQ ALFGTVLLYF
AAGQVEGMGE YGLQWSVLHA HAAELNPTVM SIAFVFLLVG YGTKIGLVPL HNWLPDAHSE
GPTPMSAILS GLLLNDALYA VVRSKMLVDG SLQSQLAGHL MMGFGLLSFL VAALFLHRQR
DIKRLFSYSS IEHMGIMTFA FGLGGPLATF AALMHMTVHS LTKSAIFVTV GHAAQITRTQ
RIEHIRGLLR TQPMVGWGLV LGVVAIAGMP PFGVFTSEFL VLTATMQEFP WLTPLLLLGI
AIAFAGLFRH LHPMAYGPRP AGQAPVQANL WPVMAHLGIV LWLGLAIPGV LADWFSQATR
LIAGSAPL