Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1114 |
Symbol | xpsE |
ID | 3103952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1169534 |
End bp | 1171291 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637170299 |
Product | general secretion pathway protein E |
Protein accession | YP_113584 |
Protein GI | 53804537 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGG CAGTATCGAG AAAGACCGAG GCGGAACCGC TCGTGCCCGC CGAGTTGTTG CAGGATCCTG ACGGCTATGG CCGATTCGCC GATGCCCTGC TTCGGCGCGG CAAGGTCCGC GAAATGGATC TGGCAAGGGC GAAGCGCCTC GCGGCACAGG CGGACGAGCT GCGCCTCCCC GCCTTGCTGG TCAAGCTGGG CGTGGTCTCG GAGCGTGACG TGGCCGAGAC CCTGGCCGAA GCCAGCGGTC TTCCCCTGAT CGGTCCCACC GATTATCCCG ACGTGTCGCC CTTGCCGGAA GGCATCGCGT CCCGGTTTCT CAAGGATCGT CATGCCGTCG GCATCGCGGC CAGGGCCGAC GGTTTCGTCG TGGCGGTGGA GGATCCGTTC GATGCCGAGC TGATCCATGC GCTCGGGCTG GCCTGTGGTC AGCCGGTCCA TCCGGTGGTC GGTCTGGCCT CGGAGATCGA CCGGGCGCTG GAGCAGCAGA TCGGCTCGGG CCGTTCGGTG ATGGGCCAAA TCGTCGAAAA CCTGGGCGGC GACGAGGACG CCGACGAGGC CGACGTCGAA CACCTGAAGG ATCTCGCCAG CGAAGCGCCG GTGATCCGCA TGGTGAACCT CATCATGCAG CGCGCGGTGG AATCGCGCGC CTCGGACATC CATGTCGAGC CCTTCGAGCA GACGCTCAAG GTACGGTTCC GCATCGACGG CGTGTTGCGC GATGTGGAAG CGCCGCCGGT ACGCTCCACC GCGGCGGTGA TTTCGCGCAT CAAGATCATG GCCAAGCTCA ACATCGCCGA GCGGCGCCTG CCGCAGGACG GCCGGATCAA GCTGCAGGTG CAGGGGAAGG AGCTGGATCT GCGCGTTTCC ACCGTGCCCA CGATGTACGG TGAGAGCGTC GTGATCCGGC TTCTGCACAA AGAGAGCATC ACCTTCGATT TCGGCACGCT GGGATTCGAT GGTTCGGTGT TGCGGCGTTT CCTCGAGATC CTCGAGCTAC CCCACGGTAT CATCCTGATC ACGGGACCCA CCGGCAGCGG CAAAAGCACC ACGCTGTATA CCGCCCTGCA CAAGATCAAC ACGCCTTCGC GCAAGATCAT CACGGTCGAG GACCCGGTGG AATACCAGCT GGAAGGCGTC AACCAGATCC AGGTCAAGCC CCAGATCGGT CTGAATTTCG CGAGCGCGCT GCGCTCCATC ATGCGTCAGG ACCCGGATGT GATCATGATC GGTGAGATGC GCGATCTGGA GACGGCCCGT ATCGCCGTGC AATCGGCGCT GACCGGCCAC CTGGTACTGT CCACGCTGCA CACCAATGAC GCCGCCGGCG GCGTGACCCG TCTTTTGGAC ATGGGGCTCG AGGACTATCT CATCACCTCG ACCGTGAATG GTATTCTCGG CCAGCGTCTG GTGCGGCGGC TGTGTCAGAG TTGCCGCGAA CCACATCCGG CGCTGGAGGA GGTCGCGGAA GAAATGGGGC TGCGGCGGTT CCAGCGTGAC GGCGAGGTGG TGCTGTACCG GCCGGTCGGC TGCGAACAAT GCGGCGGCAC CGGTTTTCGT GGACGGCTCG CGATCCTCGA GTTCCTGGTC ATGTCCGACG AGGTGCGGCG GTTGGTGATG AGTCACGCCC AGGCGCGGCA GATCGAGGAG GTCGCCCTAC GCGAAGGCAT GCATACCATG TATGACGATG GTGTCCGCAA GGCTTTGATG GGGCTGACCA CCGTCGAAGA GGTCCTGCGC GTCACCTCGG ATTCCTGA
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Protein sequence | MTQAVSRKTE AEPLVPAELL QDPDGYGRFA DALLRRGKVR EMDLARAKRL AAQADELRLP ALLVKLGVVS ERDVAETLAE ASGLPLIGPT DYPDVSPLPE GIASRFLKDR HAVGIAARAD GFVVAVEDPF DAELIHALGL ACGQPVHPVV GLASEIDRAL EQQIGSGRSV MGQIVENLGG DEDADEADVE HLKDLASEAP VIRMVNLIMQ RAVESRASDI HVEPFEQTLK VRFRIDGVLR DVEAPPVRST AAVISRIKIM AKLNIAERRL PQDGRIKLQV QGKELDLRVS TVPTMYGESV VIRLLHKESI TFDFGTLGFD GSVLRRFLEI LELPHGIILI TGPTGSGKST TLYTALHKIN TPSRKIITVE DPVEYQLEGV NQIQVKPQIG LNFASALRSI MRQDPDVIMI GEMRDLETAR IAVQSALTGH LVLSTLHTND AAGGVTRLLD MGLEDYLITS TVNGILGQRL VRRLCQSCRE PHPALEEVAE EMGLRRFQRD GEVVLYRPVG CEQCGGTGFR GRLAILEFLV MSDEVRRLVM SHAQARQIEE VALREGMHTM YDDGVRKALM GLTTVEEVLR VTSDS
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