Gene MCA1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1094 
SymbolpyrF 
ID3104569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1149587 
End bp1150315 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID637170280 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_113565 
Protein GI53804571 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.596439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAATT TCCTTTCGAA CAAGCCCATT CCCGTGGCCG ATCGCCTGAT CATGGCGCTG 
GACCTGCCGG ATGTCTCCGA AGCCAAGACC TTGGTGGAAC GCCTCGGCGA CGCCGTGAGC
TTCTACAAGG TGGGGCTGGA ACTGTTCATG TCCGGCGACT GTTTCGCTTT GGTGGATTGG
CTCAAGGCCA AAGACAAGAA GGTTTTCGTC GATCTCAAGT TCTTCGACGT GCCGGAGACC
GTCGGCCGCG CGGTCAAGGC GCTGAGCCGG CGCGGGGTGG ATTTCGCCAC CGTGCACGGC
AACGATGCGA TCATGGAGGC GGCGGCCCGC AACAAGGGGA GCCTCGGCAT TCTGGCGGTC
ACGGTTCTGA CCAGCCTGGA CCAGGGGGAT CTGCGTGATC TCGGCTTCCA GTGCGACGTG
CAGGAATTGG TCTTGTCCCG TGCCCGGCGC GCCCTGGCAG TGGGTTGCGA CGGGGTGGTG
TCGTCCGGGC TCGAGGTCCC GCTGTTGCGC GGTGAGATCG ACCACGAGCT AATGGTCGTG
TCGCCCGGCA TCCGGCCTGT CGAAAACCGT CCTGAGGACG ACCAGAAGCG GGTGGTTACG
GTCGATCAGG CGTTCCGCAA CGGTGCCGAT TACATCGTGG TGGGGCGGCC GATCCGCGAT
GCAGCCGATC CCCGCGAGGC TGCCCAGCGG GCACAGGCTC AGATCCGCGA CGTGTTCGCG
GCGGGCTGA
 
Protein sequence
MPNFLSNKPI PVADRLIMAL DLPDVSEAKT LVERLGDAVS FYKVGLELFM SGDCFALVDW 
LKAKDKKVFV DLKFFDVPET VGRAVKALSR RGVDFATVHG NDAIMEAAAR NKGSLGILAV
TVLTSLDQGD LRDLGFQCDV QELVLSRARR ALAVGCDGVV SSGLEVPLLR GEIDHELMVV
SPGIRPVENR PEDDQKRVVT VDQAFRNGAD YIVVGRPIRD AADPREAAQR AQAQIRDVFA
AG