Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1094 |
Symbol | pyrF |
ID | 3104569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1149587 |
End bp | 1150315 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637170280 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_113565 |
Protein GI | 53804571 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.596439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAATT TCCTTTCGAA CAAGCCCATT CCCGTGGCCG ATCGCCTGAT CATGGCGCTG GACCTGCCGG ATGTCTCCGA AGCCAAGACC TTGGTGGAAC GCCTCGGCGA CGCCGTGAGC TTCTACAAGG TGGGGCTGGA ACTGTTCATG TCCGGCGACT GTTTCGCTTT GGTGGATTGG CTCAAGGCCA AAGACAAGAA GGTTTTCGTC GATCTCAAGT TCTTCGACGT GCCGGAGACC GTCGGCCGCG CGGTCAAGGC GCTGAGCCGG CGCGGGGTGG ATTTCGCCAC CGTGCACGGC AACGATGCGA TCATGGAGGC GGCGGCCCGC AACAAGGGGA GCCTCGGCAT TCTGGCGGTC ACGGTTCTGA CCAGCCTGGA CCAGGGGGAT CTGCGTGATC TCGGCTTCCA GTGCGACGTG CAGGAATTGG TCTTGTCCCG TGCCCGGCGC GCCCTGGCAG TGGGTTGCGA CGGGGTGGTG TCGTCCGGGC TCGAGGTCCC GCTGTTGCGC GGTGAGATCG ACCACGAGCT AATGGTCGTG TCGCCCGGCA TCCGGCCTGT CGAAAACCGT CCTGAGGACG ACCAGAAGCG GGTGGTTACG GTCGATCAGG CGTTCCGCAA CGGTGCCGAT TACATCGTGG TGGGGCGGCC GATCCGCGAT GCAGCCGATC CCCGCGAGGC TGCCCAGCGG GCACAGGCTC AGATCCGCGA CGTGTTCGCG GCGGGCTGA
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Protein sequence | MPNFLSNKPI PVADRLIMAL DLPDVSEAKT LVERLGDAVS FYKVGLELFM SGDCFALVDW LKAKDKKVFV DLKFFDVPET VGRAVKALSR RGVDFATVHG NDAIMEAAAR NKGSLGILAV TVLTSLDQGD LRDLGFQCDV QELVLSRARR ALAVGCDGVV SSGLEVPLLR GEIDHELMVV SPGIRPVENR PEDDQKRVVT VDQAFRNGAD YIVVGRPIRD AADPREAAQR AQAQIRDVFA AG
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