Gene MCA1059 details

Gene Information

• Locus tag: MCA1059
• Symbol: tuf-1
• ID: 3102907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1109771
• End bp: 1110961
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637170247
• Product: elongation factor Tu
• Protein accession: YP_113534
• Protein GI: 53804631
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0050] GTPases - translation elongation factors
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0877336
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAAG AGAAATTTAC GCGCACGAAA CCGCATGTGA ATGTGGGAAC GATAGGTCAC 
GTGGATCATG GGAAGACGAC GCTGACGGCG GCCCTGACCA AGTGCATGGC GGCGAAGTTT 
GGGGGTGAAT TCAAGGCCTA CGACCAGATC GACGCGGCGC CGGAAGAGCG TGCGCGCGGC 
ATCACCATCG CCACGGCTCA CGTGGAATAC GAATCGGCGG CGCGTCACTA CGCTCACGTC 
GACTGCCCTG GGCATGCCGA CTACGTCAAG AACATGATCA CCGGAGCGGC CCAGATGGAC 
GGTGCCATCC TGGTCGTGTC CGCAGCCGAC GGCCCGATGC CGCAGACCCG GGAACACATC 
CTGCTGGCGC GGCAGGTGGG TGTGCCCTAC ATCGTCGTGT TCCTGAACAA GGCCGACATG 
GTGGACGATC CCGAGCTGCT CGAACTGGTG GAGATGGAGG TGCGTGAACT GCTCTCCAAG 
TACGATTTCC CGGGGGACGA CATCCCGATC ATCAAGGGCT CGGCGCTGAA GGCGCTGGAA 
GGCGATGGCA GCGAAATCGG CGTGCCGGCG GTGGAAGCGC TGGTGCAGGC GCTGGACGAC 
TACATTCCCG AGCCCGAGCG GGCGATCGAC CGGCCGTTCC TCATGCCGAT CGAAGACGTG 
TTCTCGATAT CCGGGCGCGG CACCGTGGTC ACCGGGCGGG TCGAGCGCGG GATCATCAAG 
GTGGGAGAGG AAATCGAGAT CGTCGGCATC CGTCCGACGG CCAAGACCAC CTGCACCGGC 
GTGGAAATGT TCCGGAAGCT GCTGGATCAG GGACAGGCCG GCGACAACAT CGGCGTGCTG 
TTGCGCGGCA CCAAGCGGGA AGACGTCGAG CGCGGGCAGG TGCTGGCCAA GCCCGGCAGC 
ATCACCCCGC ACACGCACTT CGAAGCCGAG ATCTACGTTC TGTCCAAGGA AGAAGGAGGG 
CGTCACACGC CGTTCTTCAA CGGCTACCGG CCGCAGTTCT ACTTTCGGAC CACTGATGTC 
ACCGGCGCGG TGACGCTGCC GGAAGGGGTC GAGATGGTCA TGCCGGGTGA CAACGTCAAG 
ATCGAAGTGA AGCTGATCGC GCCGATTGCA ATGGACGAAG GCTTGCGGTT TGCCGTGCGC 
GAGGGCGGTC GTACCGTCGG CGCAGGCGTT GTCTCCAAGA TCATCGAGTA A 

 

Protein sequence

MSKEKFTRTK PHVNVGTIGH VDHGKTTLTA ALTKCMAAKF GGEFKAYDQI DAAPEERARG 
ITIATAHVEY ESAARHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 
LLARQVGVPY IVVFLNKADM VDDPELLELV EMEVRELLSK YDFPGDDIPI IKGSALKALE 
GDGSEIGVPA VEALVQALDD YIPEPERAID RPFLMPIEDV FSISGRGTVV TGRVERGIIK 
VGEEIEIVGI RPTAKTTCTG VEMFRKLLDQ GQAGDNIGVL LRGTKREDVE RGQVLAKPGS 
ITPHTHFEAE IYVLSKEEGG RHTPFFNGYR PQFYFRTTDV TGAVTLPEGV EMVMPGDNVK 
IEVKLIAPIA MDEGLRFAVR EGGRTVGAGV VSKIIE