Gene MCA1058 details

Gene Information

• Locus tag: MCA1058
• Symbol: pth
• ID: 3102908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1108785
• End bp: 1109348
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637170243
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_113533
• Protein GI: 53804632
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0054523
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAGAC TGATCGTCGG TCTCGGCAAC CCGGGACCGG CTTATGACAG AACCCGGCAC 
AATGCCGGGT TCTGGTTCAT CGACAGGTTG GCAGCCGCGC ATGGCTGCGT CTTGCGGGAA 
GAATCCCGTT TTCATGGTCG CGTCGGTGCG ATCAATCTGA CCGAGCCCGT TCATCTCCTG 
GCTCCATTGA CATTCATGAA CCGGAGCGGG CTCGCGGTGG CGGCAATGGC CAGGTTCTAC 
AAGATCGCCC CCGAGCACAT CCTGGTGGTT CACGACGAGC TCGACTTCGG GCCGGGAGTC 
GTTCGCATCA AGCGGGACGG CGGACACGGG GGTCATAACG GTCTCCGTGA CATCATGGCG 
CAACTGGGGA GCGGCGGATT TCTGCGGCTG CGGATCGGGA TCGGCCGGCC GGCCGGATCC 
ATGGCGGTGG CGGATTACGT GCTGGCCGCG CCGTCCGTCA GCGATCGTCA GGCTATTTCC 
GGAGCGATAG AGAAAGCCCT GGCCTGTTTG TCCGAATTAT TGGCCGGTCA TGTCGAACAG 
GTGATGAACC GTCTGCATGT CTGA 

 

Protein sequence

MVRLIVGLGN PGPAYDRTRH NAGFWFIDRL AAAHGCVLRE ESRFHGRVGA INLTEPVHLL 
APLTFMNRSG LAVAAMARFY KIAPEHILVV HDELDFGPGV VRIKRDGGHG GHNGLRDIMA 
QLGSGGFLRL RIGIGRPAGS MAVADYVLAA PSVSDRQAIS GAIEKALACL SELLAGHVEQ 
VMNRLHV