Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1055 |
Symbol | ispE |
ID | 3104018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1106161 |
End bp | 1107036 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637170239 |
Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
Protein accession | YP_113530 |
Protein GI | 53804650 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGTC GGGAATCCTC CGTCATGAAG TCGCCTTCTC TGCGTTTGCC GGCACCGGCC AAGCTCAATC TAACCCTTCG TATCACGGGT CGCCGTCCCG ACGGATACCA TGATCTGCAG ACGGTGTTCC AATTCGTGGA CGTGTGCGAC TGGCTCGAAT TCCGCGCCGA TGCCTCCGGC GAAATCCGCT TGCAGACTTC ACTGGCGGGC GTGCCGGCGG AACGGAATCT GATCGTCCGT GCCGCCCGCC TGCTCAAGGA ATATGCAGGC GTGGCCGCCG GGGCCGACAT CGTCTTGGAG AAAAACCTAC CGATGGGGGG CGGTCTGGGC GGCGGAAGCT CGAATGCGGC GACCACGCTG GTGGCGCTGA ACCGCTTGTG GGATCTGGGT CTGGACCGGC AAACGCTGAT GAATCTCGGT CTCCGCCTCG GAGCGGACGT GCCGATCTTC GTGTTCGGCG AGGGCGCCTG GGCGGAAGGT GTGGGCGAAA GGTTGCAAGT CCTGGAACTG CCCGAGCCGT GGTACGTCAT CGTTGTGCCG CCATGCCATG TTTCGACGGC CGAGATATTC AACGCCCCTG ATTTGACAAG AGATAACGAC CCGATCACAA TAGCGGACTT CCTTGCGGGA TCCCATCAGA ATCATTGCCT GGACGCCGTC GTGCGTCGAT ATCCCGTGGT GGGCGAGGCG ATGTGCGTGT TGGGGCGATA CTCCCGGGAT GTCCGGCTAA CGGGTACGGG TGCCTGCGTA TATTCGGTCC ACGGTAGCGA GGAAGAAGCC AAGGCCGCAT GCGACGATCT GTCCCGCGAT TGGGTCGCGA TAGTGGCGTC CGGCCGCAAC CTGTCGCCTC TGTACGAGGC GCTGAACGAA CGATAG
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Protein sequence | MDRRESSVMK SPSLRLPAPA KLNLTLRITG RRPDGYHDLQ TVFQFVDVCD WLEFRADASG EIRLQTSLAG VPAERNLIVR AARLLKEYAG VAAGADIVLE KNLPMGGGLG GGSSNAATTL VALNRLWDLG LDRQTLMNLG LRLGADVPIF VFGEGAWAEG VGERLQVLEL PEPWYVIVVP PCHVSTAEIF NAPDLTRDND PITIADFLAG SHQNHCLDAV VRRYPVVGEA MCVLGRYSRD VRLTGTGACV YSVHGSEEEA KAACDDLSRD WVAIVASGRN LSPLYEALNE R
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