| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1032 |
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| Symbol | |
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| ID | 3102226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1083865 |
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| End bp | 1086072 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637170217 |
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| Product | S1 RNA-binding domain-containing protein |
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| Protein accession | YP_113508 |
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| Protein GI | 53804824 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.013008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTTTCA TCGCGCGCTA CCGCAAGGAA GTGACCGGGG GTCTGGATGA TACCCAATTG
CGCACCCTGG AAGTCCGCCT CGGCTATCTG CGCGAGCTGA ATGACCGACG CGAAGTCATT
CTGGCCAGCA TCGCCGAACA GGGCAAGCTG ACCACGGAGC TGGAGCAGGC CATCCGTGAG
GCCGATACCA AGACCGGGCT CGAAGACCTG TATCTTCCCT ACCGGCCGAG GCGGCGGACC
AAGGCACAGA TCGCCCGAGA GGCGGGTTTG GAGCCTCTGG CCGATGCGTT GCTGGCCGAA
CCGGCGCTCG AACCTCTGGC GACGGCGGCC GGCTATGTCG ATGCCGGCAA AGGCGTGGCC
GATGCCGGCG CAGCCTTGGA CGGTGCCCGT CAAATCCTGA TGGAGCGCTT CGCCGAGGAG
GCGACCTTGG CGGGCGAGTT GCGTGAAAAG GTGTGGAGCG AAGGGCTTCT GGTTTCGTCC
CTGGTGGATG GCAAGGCAGA GGGAGGAGCG AAGTTCAAGG ATTATTTCGA CTATGAGGAG
GCGCTGGCCG GGATTCCTTC GCACCGCGCC CTGGCCCTGC TGCGCGGGCG CAATGAAGGC
GTCCTGTCGC TGGTTCTGCG GGTGGCCAAG GACGAGGAAG CCGGCCACCG GTTCGCCGAA
CACCGCATCG CCAGCGCTTT CGCCATCGCC GACCGCGGAC GTCCGGCGGA CTCCTGGTTG
TTGGAAACCG TGCGCCTGGC CTGGAGGGTG AAGCTTCTCA CCCGCATCGA ACTCGATCTG
ATGCAGCGCC TGCGGGAGAC GGCGGAGGCC GAGGCCATCC GGGTGTTCGC CAGCAACCTG
AAGGATTTGC TGCTGGCCGC GCCGGCCGGG CAGCGCGCCA CCCTGGGGTT GGATCCGGGG
TTGCGCACCG GGGTCAAGGT CGCCGTGGTC GATGGCACCG GCAAACTGGT GGCCACCGAT
ACGATCTATC CGCATGCCCC CAGGAACCAG TGGGATCAGT CCATCGCCAC GCTGGCCGCG
CTGATCGCGC GCCACGGCGT CAGCCTGGTC AGCATTGGCA ACGGCACCGC TTCGCGCGAG
ACCGACCAAT TGGTGGCCGA TCTGATGCAG CGCCATCCGG AACTGGGCGT GACCCGCGTG
GTGGTGTCGG AGGCCGGGGC CTCGGTGTAT TCGGCCTCGG AGCTGGCAGC GCAGGAATTT
CCCGAGCTGG ACGTATCGTT GCGCGGCGCG GTGTCCATCG CCCGCCGCCT ACAGGATCCG
CTGGCGGAGC TGGTCAAGAT CGATCCCAAG TCGATAGGCG TCGGCCAGTA CCAGCACGAC
GTCAACCAGG CCCAACTCGG CCGTACCCTC GATGCGGTGG TGGAGGACTG CGTGAACGCG
GTGGGGGTGG ACGTCAACAC CGCTTCGGTC TCGCTGCTGC GTTACGTCTC CGGCCTGTCG
CCGAGTCTGG GCCGGAATAT CGTGGAATAC CGCAACCAGC ATGGGCCGTT CGCCAATCGG
GAGCAGCTGA GGCAGGTCTC GCGGCTCGGG CCGAAGGCCT TCGAGCAGGC CGCAGGCTTC
CTGCGCATCG CCAATGGCGA ACATCCGTTG GATGCGTCCG CCGTGCATCC GGAAGCCTAT
CCGGTGGTGG AGAAGATCGT CCGGCGCACT GGCAAGGATA TCCGTGAGCT GATCGGCAAC
GTGGCCTTCC TGCGCAGCGT GAATGCCGAG CAGTTCACCG ACGAGCGCTT CGGCCTGCCC
ACCGTCACCG ACATCCTGCG CGAACTGGAG AAGCCCGGTC GTGATCCGCG GCCGGAGTTC
AAGACCGCCC GCTTCAAGGA GGGGGTGACC GAGCCGAAGG ACCTCGAGCC GGGCATGCGG
CTGGAAGGGG TGGTGACCAA CGTCACCAAT TTCGGCGCCT TCGTCGATGT CGGCGTGCAT
CAGGACGGTC TGGTCCACAT CTCCCACCTG GCGGACAGGT TCGTGCGCGA CCCGCGCGAA
GTGGTCAAGG CCGGGGATGT GGTCCAAGTG AAGGTGCTGG AGGTCGATAT CCCGCGCAGG
CGGATCGCCC TGTCGATGCG CAGCGACGCG GCGAAGGGCG AAGCGGAGCC GCCGCGCCGG
GAAACGGGAG AGACGGCCGG CAAGCCGCGC CGCAGAGCCG CTCCCCAGCC GGTACGGCAA
GGCGCGATGG CCGAGGCGTT GGCGCAGGCC TTGAAGCGCG GGCGCTGA
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| Protein sequence | MPFIARYRKE VTGGLDDTQL RTLEVRLGYL RELNDRREVI LASIAEQGKL TTELEQAIRE
ADTKTGLEDL YLPYRPRRRT KAQIAREAGL EPLADALLAE PALEPLATAA GYVDAGKGVA
DAGAALDGAR QILMERFAEE ATLAGELREK VWSEGLLVSS LVDGKAEGGA KFKDYFDYEE
ALAGIPSHRA LALLRGRNEG VLSLVLRVAK DEEAGHRFAE HRIASAFAIA DRGRPADSWL
LETVRLAWRV KLLTRIELDL MQRLRETAEA EAIRVFASNL KDLLLAAPAG QRATLGLDPG
LRTGVKVAVV DGTGKLVATD TIYPHAPRNQ WDQSIATLAA LIARHGVSLV SIGNGTASRE
TDQLVADLMQ RHPELGVTRV VVSEAGASVY SASELAAQEF PELDVSLRGA VSIARRLQDP
LAELVKIDPK SIGVGQYQHD VNQAQLGRTL DAVVEDCVNA VGVDVNTASV SLLRYVSGLS
PSLGRNIVEY RNQHGPFANR EQLRQVSRLG PKAFEQAAGF LRIANGEHPL DASAVHPEAY
PVVEKIVRRT GKDIRELIGN VAFLRSVNAE QFTDERFGLP TVTDILRELE KPGRDPRPEF
KTARFKEGVT EPKDLEPGMR LEGVVTNVTN FGAFVDVGVH QDGLVHISHL ADRFVRDPRE
VVKAGDVVQV KVLEVDIPRR RIALSMRSDA AKGEAEPPRR ETGETAGKPR RRAAPQPVRQ
GAMAEALAQA LKRGR
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