Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1032 |
Symbol | |
ID | 3102226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1083865 |
End bp | 1086072 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637170217 |
Product | S1 RNA-binding domain-containing protein |
Protein accession | YP_113508 |
Protein GI | 53804824 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.013008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTTTCA TCGCGCGCTA CCGCAAGGAA GTGACCGGGG GTCTGGATGA TACCCAATTG CGCACCCTGG AAGTCCGCCT CGGCTATCTG CGCGAGCTGA ATGACCGACG CGAAGTCATT CTGGCCAGCA TCGCCGAACA GGGCAAGCTG ACCACGGAGC TGGAGCAGGC CATCCGTGAG GCCGATACCA AGACCGGGCT CGAAGACCTG TATCTTCCCT ACCGGCCGAG GCGGCGGACC AAGGCACAGA TCGCCCGAGA GGCGGGTTTG GAGCCTCTGG CCGATGCGTT GCTGGCCGAA CCGGCGCTCG AACCTCTGGC GACGGCGGCC GGCTATGTCG ATGCCGGCAA AGGCGTGGCC GATGCCGGCG CAGCCTTGGA CGGTGCCCGT CAAATCCTGA TGGAGCGCTT CGCCGAGGAG GCGACCTTGG CGGGCGAGTT GCGTGAAAAG GTGTGGAGCG AAGGGCTTCT GGTTTCGTCC CTGGTGGATG GCAAGGCAGA GGGAGGAGCG AAGTTCAAGG ATTATTTCGA CTATGAGGAG GCGCTGGCCG GGATTCCTTC GCACCGCGCC CTGGCCCTGC TGCGCGGGCG CAATGAAGGC GTCCTGTCGC TGGTTCTGCG GGTGGCCAAG GACGAGGAAG CCGGCCACCG GTTCGCCGAA CACCGCATCG CCAGCGCTTT CGCCATCGCC GACCGCGGAC GTCCGGCGGA CTCCTGGTTG TTGGAAACCG TGCGCCTGGC CTGGAGGGTG AAGCTTCTCA CCCGCATCGA ACTCGATCTG ATGCAGCGCC TGCGGGAGAC GGCGGAGGCC GAGGCCATCC GGGTGTTCGC CAGCAACCTG AAGGATTTGC TGCTGGCCGC GCCGGCCGGG CAGCGCGCCA CCCTGGGGTT GGATCCGGGG TTGCGCACCG GGGTCAAGGT CGCCGTGGTC GATGGCACCG GCAAACTGGT GGCCACCGAT ACGATCTATC CGCATGCCCC CAGGAACCAG TGGGATCAGT CCATCGCCAC GCTGGCCGCG CTGATCGCGC GCCACGGCGT CAGCCTGGTC AGCATTGGCA ACGGCACCGC TTCGCGCGAG ACCGACCAAT TGGTGGCCGA TCTGATGCAG CGCCATCCGG AACTGGGCGT GACCCGCGTG GTGGTGTCGG AGGCCGGGGC CTCGGTGTAT TCGGCCTCGG AGCTGGCAGC GCAGGAATTT CCCGAGCTGG ACGTATCGTT GCGCGGCGCG GTGTCCATCG CCCGCCGCCT ACAGGATCCG CTGGCGGAGC TGGTCAAGAT CGATCCCAAG TCGATAGGCG TCGGCCAGTA CCAGCACGAC GTCAACCAGG CCCAACTCGG CCGTACCCTC GATGCGGTGG TGGAGGACTG CGTGAACGCG GTGGGGGTGG ACGTCAACAC CGCTTCGGTC TCGCTGCTGC GTTACGTCTC CGGCCTGTCG CCGAGTCTGG GCCGGAATAT CGTGGAATAC CGCAACCAGC ATGGGCCGTT CGCCAATCGG GAGCAGCTGA GGCAGGTCTC GCGGCTCGGG CCGAAGGCCT TCGAGCAGGC CGCAGGCTTC CTGCGCATCG CCAATGGCGA ACATCCGTTG GATGCGTCCG CCGTGCATCC GGAAGCCTAT CCGGTGGTGG AGAAGATCGT CCGGCGCACT GGCAAGGATA TCCGTGAGCT GATCGGCAAC GTGGCCTTCC TGCGCAGCGT GAATGCCGAG CAGTTCACCG ACGAGCGCTT CGGCCTGCCC ACCGTCACCG ACATCCTGCG CGAACTGGAG AAGCCCGGTC GTGATCCGCG GCCGGAGTTC AAGACCGCCC GCTTCAAGGA GGGGGTGACC GAGCCGAAGG ACCTCGAGCC GGGCATGCGG CTGGAAGGGG TGGTGACCAA CGTCACCAAT TTCGGCGCCT TCGTCGATGT CGGCGTGCAT CAGGACGGTC TGGTCCACAT CTCCCACCTG GCGGACAGGT TCGTGCGCGA CCCGCGCGAA GTGGTCAAGG CCGGGGATGT GGTCCAAGTG AAGGTGCTGG AGGTCGATAT CCCGCGCAGG CGGATCGCCC TGTCGATGCG CAGCGACGCG GCGAAGGGCG AAGCGGAGCC GCCGCGCCGG GAAACGGGAG AGACGGCCGG CAAGCCGCGC CGCAGAGCCG CTCCCCAGCC GGTACGGCAA GGCGCGATGG CCGAGGCGTT GGCGCAGGCC TTGAAGCGCG GGCGCTGA
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Protein sequence | MPFIARYRKE VTGGLDDTQL RTLEVRLGYL RELNDRREVI LASIAEQGKL TTELEQAIRE ADTKTGLEDL YLPYRPRRRT KAQIAREAGL EPLADALLAE PALEPLATAA GYVDAGKGVA DAGAALDGAR QILMERFAEE ATLAGELREK VWSEGLLVSS LVDGKAEGGA KFKDYFDYEE ALAGIPSHRA LALLRGRNEG VLSLVLRVAK DEEAGHRFAE HRIASAFAIA DRGRPADSWL LETVRLAWRV KLLTRIELDL MQRLRETAEA EAIRVFASNL KDLLLAAPAG QRATLGLDPG LRTGVKVAVV DGTGKLVATD TIYPHAPRNQ WDQSIATLAA LIARHGVSLV SIGNGTASRE TDQLVADLMQ RHPELGVTRV VVSEAGASVY SASELAAQEF PELDVSLRGA VSIARRLQDP LAELVKIDPK SIGVGQYQHD VNQAQLGRTL DAVVEDCVNA VGVDVNTASV SLLRYVSGLS PSLGRNIVEY RNQHGPFANR EQLRQVSRLG PKAFEQAAGF LRIANGEHPL DASAVHPEAY PVVEKIVRRT GKDIRELIGN VAFLRSVNAE QFTDERFGLP TVTDILRELE KPGRDPRPEF KTARFKEGVT EPKDLEPGMR LEGVVTNVTN FGAFVDVGVH QDGLVHISHL ADRFVRDPRE VVKAGDVVQV KVLEVDIPRR RIALSMRSDA AKGEAEPPRR ETGETAGKPR RRAAPQPVRQ GAMAEALAQA LKRGR
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