| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0984 |
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| Symbol | |
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| ID | 3102564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1027920 |
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| End bp | 1030352 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170172 |
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| Product | sensory box protein |
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| Protein accession | YP_113463 |
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| Protein GI | 53804908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGA TCGACGGACC GGGGGAATTG GTGCGGCCCG CCGGCCTTCT TCCGGCGGCT
GCCACCTGTA TTCTGGAGCA GCACCCGGAT GGCCATGTCA CGGTCGTCCA TGCCGACCCC
GGGATGGAGG ACATGTTCGG GGCGGAGCCC GGCCGCCTCC TGCACGCCGC CGGCATCGAA
GCATCGATGT GGCCGGAGGA TCGGCGGCGG GCGGAGCCGC GGCAGGAAAC GGCCCAGCGC
GGTCCGATGC CGCTCAGGAC GGAGTTCCCG GTCGAACATC CCGTCCGGGG GCCACGCTGG
CTCGAGCTTT CCGCAGTGCC AGAGCCTCTG TCGGACGGCG CGATCCGCTG GCACGGGTTT
CTCACGGATG TCACCGAACG CAGGCAGGCC GAGGTGCAAG CCGGGCTGGT CGGCAAGGCG
CTGGATCACC TCGCGGAAAT GGTGTCGATC TGCAATGCCG AGGGTCGGTT CGTCTATGTC
AACGAAGCGT GGCGAAAGGC CCTGGGTTAC CGCGGCGAGG AGTTTCTGAA CCTGTCCGTC
GCCGAGGTCG TGCCCGATCT GGGGTCACGG TCCTGGGCCG GTCATTTCCG CGAAATCCGG
GAGAAGACTT CCGCCCAGTG GGAAACCATC CACCGTACCC GAGACGGCCA TCGGGTGCCG
GTCGTCGTCG ACGCCCGCTA TCTGGAGCAC GAAGGCTGCG GCTACGTGCT GGCATTGGTG
CGCGACACCC GCCTCCTCAA GCGGACGGAT ACGGCATTGC TCCGGCGTGA ACGCGAGTTC
CGCTCGCTCG CCGAGAATTC ACCCGATAGC ATCATGCGAT ACGACCGGGA TTGCCGCATC
GTCTACCTCA ATCCCAGTCT GGAGAACACG CTGCTGTTTT CCGCCAGCGA CATGATCGGC
CGGACACCGA CCGAGCTCCA TCCCGGTGAC GAGCGGTTCG AAACTTACGA GAGCAAGCTC
AGGGCGGTCG TCGCCACCGG CAAGGCCGAC GAAATAGAAC TCCTGCTGCA GGGTACGCAC
AAAGGTCCCC GCCTGCTTCA CATCCGTCTG GTGGCGGAAC ACGATCCGGA TGGCGAATGC
ACCGGTGTGC TGGCGGTCGG TCGGGACATC ACCGAGGTGG ACGAATACCG GCGGCGCATT
CAACGCCTGG CGTTCTTCGA TCCGCTCACC GACCTGCCCA ACCGGGCATT GCTCAACGAC
CGGATCCGCC AGTGTCTGAC CGATGCCGCT GCCCGAGGCA GTCAGTTCGG TCTGATGCTG
CTCGACCTGG ACCGCTTCAA GGAGGTGAAC GACACGCTGG GGCACAGCGC CGGCGACCGG
CTGCTGTGCG AGGCTGCCCG GCGCCTGAAC GCATGCGTCC GCGGCTACGA CACCGTGGCG
CGGCTGGGTG GAGACGAGTT CTCGATCCTG TTGCCAGTGG TACGCGATCG GGGCGATCTC
CGCGCCATCG CCGGCAGGAT ACTCGAGGCC TTCGGCGAGG CCTTCATCAT CGAAGGCAAG
GAGCTGTTCG TTTCGGTCAG CATCGGGATC GTCCTGCATA TGGAAGGCCA GTGTGACGCG
GACCGGCTGT TCAAGCAGGC GGATCTGGCC ATGTACCATG CCAAGCGACA AGGCCGGAAC
AATTTCCAGT TCTACGCGGA GGAGCTCGCC GTCCAGGTAT CGGACCGTAC GGCGATGGAA
GGAGCGCTGC GCAAAGCGCT CGGGAATGGC GAACTGGAGC TGTACTATCA GCCGCAGGTG
GCCTTGCCGG CCGGACGCAT CGTCGGCGCA GAGGCCTTGC TGCGGTGGCG GCATCCGCAG
GAAGGTATCA TGACGCCCGA CCGTTTCATT CCCATAGCCG AGGAAACGGG GCTTATCCGC
GACCTGGGGC ACTGGGTCCT GACGACCGCC TGCCGCCGGG CGGTCTACTG GCACCGGACC
GTCGATTCAC CCTTCAAAGT CGCGGTGAAC CTTTCCACCC GGCAGTTCGT CCGCAACGAT
CTGCCCGGCG AATTGCAGCG CATCGTCCAG GATACCGGCT GCCGTCCGGA ATGGCTGGAA
CTCGAGATCA CCGAGAGCCT GTTGCTCGGG AACGATGCCG AGGTCGGCGC AGCCTTGGAG
GAGCTGCACG ACATGGGCTT CGCGATTTCC ATCGACGACT TCGGCACCGG CTATTCGGCG
TTGAGTTATC TCAACCGTTT TCCGCTGGAC CAGATCAAGA TCGACCGCTC CTTCATCCAG
GGTTTTCCCG CGGACAGGGA AAAGGTGGAA CTGGTCAAAG CCATCATCTC GATTGCCGGC
GCTTTGCAAC TCGAAGTGAT CGCAGAAGGG GTGGAAACGT CTCATCAGGC GGAATATCTC
CATGCCCAAG GCTGTCGGCT GGCGCAGGGG CATTTGTTCG GCAGGCCGCT GCCGCAGGAC
CGGTTCGAGC GGCTTCTGGC GGGCAACGCC TGA
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| Protein sequence | MAVIDGPGEL VRPAGLLPAA ATCILEQHPD GHVTVVHADP GMEDMFGAEP GRLLHAAGIE
ASMWPEDRRR AEPRQETAQR GPMPLRTEFP VEHPVRGPRW LELSAVPEPL SDGAIRWHGF
LTDVTERRQA EVQAGLVGKA LDHLAEMVSI CNAEGRFVYV NEAWRKALGY RGEEFLNLSV
AEVVPDLGSR SWAGHFREIR EKTSAQWETI HRTRDGHRVP VVVDARYLEH EGCGYVLALV
RDTRLLKRTD TALLRREREF RSLAENSPDS IMRYDRDCRI VYLNPSLENT LLFSASDMIG
RTPTELHPGD ERFETYESKL RAVVATGKAD EIELLLQGTH KGPRLLHIRL VAEHDPDGEC
TGVLAVGRDI TEVDEYRRRI QRLAFFDPLT DLPNRALLND RIRQCLTDAA ARGSQFGLML
LDLDRFKEVN DTLGHSAGDR LLCEAARRLN ACVRGYDTVA RLGGDEFSIL LPVVRDRGDL
RAIAGRILEA FGEAFIIEGK ELFVSVSIGI VLHMEGQCDA DRLFKQADLA MYHAKRQGRN
NFQFYAEELA VQVSDRTAME GALRKALGNG ELELYYQPQV ALPAGRIVGA EALLRWRHPQ
EGIMTPDRFI PIAEETGLIR DLGHWVLTTA CRRAVYWHRT VDSPFKVAVN LSTRQFVRND
LPGELQRIVQ DTGCRPEWLE LEITESLLLG NDAEVGAALE ELHDMGFAIS IDDFGTGYSA
LSYLNRFPLD QIKIDRSFIQ GFPADREKVE LVKAIISIAG ALQLEVIAEG VETSHQAEYL
HAQGCRLAQG HLFGRPLPQD RFERLLAGNA
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