Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0779 |
Symbol | mxaF |
ID | 3102522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 823278 |
End bp | 825083 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637169987 |
Product | methanol dehydrogenase protein, large subunit |
Protein accession | YP_113281 |
Protein GI | 53804883 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0879687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT GCAAACTGGC AAGTGGCTGC GGCGGGTCGA TGCTGGCGAT GGCCGCCGTG CTAGCCGCGC AATCCACGCA CGCCAATTCG GAGCTGGACC GGCTGTCGAA GGACGACCGG AACTGGGTCA TGCAGACCAA GGACTACAGC GCCACCCACT TCAGCCGGCT GACGGAAATC AATAGCCACA ACGTCAAGAA CCTGAAGGTG GCCTGGACCC TGTCCACCGG CACGTTGCAT GGCCACGAAG GTGCGCCGTT GGTGGTGGAC GGCATCATGT ACATCCACAC GCCGTTCCCC AACAACGTCT ATGCAGTCGA CCTGAACGAC ACCCGCAAGA TGCTGTGGCA GTACAAGCCC AAGCAGAATC CGGCGGCCCG CGCGGTGGCT TGCTGCGACG TGGTCAACCG CGGTCTGGCC TACGTGCCGG CCGGCGAGCA CGGTCCGGCG AAGATCTTCC TCAACCAGCT TGACGGCCAC ATCGTCGCAC TCAACGCCAA GACCGGCGAA GAGATATGGA AGATGGAAAA TTCCGACATC GCCATGGGCT CCACCCTCAC CGGCGCGCCT TTCGTGGTGA AGGACAAGGT ACTGGTAGGT TCGGCCGGGG CCGAGCTGGG CGTGCGTGGC TACGTCACGG CCTATAACAT CAAGGACGGC AAGCAGGAGT GGCGGGCCTA TGCCACCGGT CCCGACGAAG ACTTGTTGCT GGACAAGGAC TTCAACAAGG ACAACCCGCA TTACGGTCAG TTCGGCCTGG GGCTCTCAAC CTGGGAGGGT GATGCCTGGA AGATCGGCGG CGGCACCAAT TGGGGCTGGT ATGCCTATGA TCCCAAGTTG GACATGATCT ACTACGGTTC CGGCAATCCG GCACCCTGGA ACGAGACCAT GCGGCCCGGC GACAACAAAT GGACCATGAC CATCTGGGGC CGCGACGCCG ACACCGGCCG CGCCAAGTTC GGCTACCAGA AGACGCCGCA CGACGAGTGG GATTACGCCG GTGTCAACTA CATGGGTCTG TCCGAACAGG AAGTGGACGG CAAGCTGACG CCGCTGCTGA CCCATCCCGA CCGCAACGGT CTGGTGTATA CGCTGAACCG GGAAACCGGC GCCCTGGTCA ATGCCTTCAA GATCGATGAC ACCGTCAACT GGGTGAAAAA GGTCGATCTG AAGACCGGCC TGCCGATCCG CGATCCGGAG TACAGCACCC GCATGGACCA CAATGCCAAA GGCATCTGTC CCTCGGCCAT GGGCTATCAC AACCAGGGCA TCGAGTCCTA CGATCCGGAC AAGAAGCTGT TCTTCATGGG CGTGAACCAC ATCTGCATGG ACTGGGAGCC GTTCATGCTG CCCTACCGCG CCGGCCAGTT CTTTGTGGGG GCGACCCTCA ACATGTATCC GGGACCCAAG GGGATGCTGG GTCAGGTCAA GGCGATGAAC GCGGTCACCG GCAAGATGGA ATGGGAAGTG CCGGAGAAGT TTGCGGTCTG GGGTGGCACC TTGGCGACCG CCGGCGACCT CGTGTTCTAC GGTACCCTCG ACGGCTTCAT CAAGGCCCGC GACACCCGTA CCGGCGAGCT GAAGTGGCAG TTCCAGTTGC CCTCCGGCGT GATCGGCCAT CCCATCACCT ATCAGCACAA CGGCAAGCAA TACATTGCCA TCTACTCCGG CGTCGGCGGC TGGCCAGGAG TAGGGCTGGT ATTCGACCTG AAGGACCCGA CCGCAGGTCT GGGAGCTGTG GGTGCGTTCA GGGAACTGGC GCATTACACC CAGATGGGTG GATCGGTGTT CGTGTTCTCG CTTTGA
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Protein sequence | MQICKLASGC GGSMLAMAAV LAAQSTHANS ELDRLSKDDR NWVMQTKDYS ATHFSRLTEI NSHNVKNLKV AWTLSTGTLH GHEGAPLVVD GIMYIHTPFP NNVYAVDLND TRKMLWQYKP KQNPAARAVA CCDVVNRGLA YVPAGEHGPA KIFLNQLDGH IVALNAKTGE EIWKMENSDI AMGSTLTGAP FVVKDKVLVG SAGAELGVRG YVTAYNIKDG KQEWRAYATG PDEDLLLDKD FNKDNPHYGQ FGLGLSTWEG DAWKIGGGTN WGWYAYDPKL DMIYYGSGNP APWNETMRPG DNKWTMTIWG RDADTGRAKF GYQKTPHDEW DYAGVNYMGL SEQEVDGKLT PLLTHPDRNG LVYTLNRETG ALVNAFKIDD TVNWVKKVDL KTGLPIRDPE YSTRMDHNAK GICPSAMGYH NQGIESYDPD KKLFFMGVNH ICMDWEPFML PYRAGQFFVG ATLNMYPGPK GMLGQVKAMN AVTGKMEWEV PEKFAVWGGT LATAGDLVFY GTLDGFIKAR DTRTGELKWQ FQLPSGVIGH PITYQHNGKQ YIAIYSGVGG WPGVGLVFDL KDPTAGLGAV GAFRELAHYT QMGGSVFVFS L
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