| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0764 |
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| Symbol | nifA |
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| ID | 3102395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 803938 |
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| End bp | 805473 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637169973 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_113267 |
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| Protein GI | 53804913 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATC GCTACACATT GATCGAGCGG GAGCTCGACG CCCTCTATCA GGTCGGCCAG
GTGTTGAACA GCACGGCCGA TCTCAAGGGC AGGCTGGAGG GTGTGCTCAA CGTCCTGCAC
GAGCAGGCCG ATCTGCGTTC CGGGATGATC GCGCTGCGGG AGCCGGAAAC CGATGCGCTG
GTATTGGCGG TACTGCGGCG GGGCGAAGCC GGGCGGACTT CCAACGAGCC GGTGCGTTAC
GAGCCGGGCG AAGGACTGAT CGGCACCATT CTGGAAGCAA ACTGCACCAT TGTGGTGGAG
CGCATCGCTG ACGAGCCGCG TTTCCTCGGC CGCCTCGGTC TCTACGATCC GGAGTTGCCC
TTCATCGGCT CGCCCATCCA TGTGGGCAAG GATGAACTGC TCGGGGTGCT GGCGGCTCAG
CCCAGCGAGC GTGAGCTGCT GGGCGAGCGC GCCAGGTTCC TGGAGATGGT GAGCAATCTG
GTCGCGCAGA GCGTCGGCCT GCTGCGCGGG ATGGAACAGA AGCAGCGCGA TCTCACGACC
CAATGCGAGC AGCTGCAACA GACGCTGCGC TCGAATTACG GATTCGAGAA CATCATCGGC
CGGACGCCGC CGATGCTGCG TGTCTTCGAG ACCGTGCGCC AGGTCGCGAA ATGGAACACG
ACGGTGCTCA TCCGGGGTGA GTCGGGCACC GGCAAGGAGA TGATCGCCAG CGCGATCCAC
TTCAATTCGC CCCGGGCGAG TGGCCCCTTC GTGAAGCTCA ACTGTGCCGC CTTGCCTGAA
AACCTGCTGG AGTCGGAACT GTTCGGCCAC GAGAAAGGCG CCTTCAGCGG CGCCGTCAAC
CAGCGCAAGG GGCGGTTCGA GCTGGCCAAC CACGGTACCC TTTTTCTGGA TGAAATCGGC
GAGATTTCAC CGGCTTTCCA GGCCAAGCTA CTGCGGGTGC TGCAGGAGGG TGAATTCGAA
CGGGTCGGCG GCATCCACAC GCTCAAAGTC GATGTGAGGA TCATTGCGGC GACCAACCGG
GATCTCGAGT CTGCGGTGGA AGAAGGGGCA TTTCGTGAGG ACCTTTATTA TCGTCTCAAC
GTGATGCCCA TCCAGATGCC TCCTCTGCGG CAGCGCAAGG AGGACATTCC GGAGCTCGCC
CGCTTCCTGC TGGGCAGAAT CTCCCGCAAC CAGGGCGGCC GGCTTCTGGA AATCAAGGAG
AGCGCCATCC GTTCGCTGAT GCGGCACGAC TGGCCCGGCA ACGTGCGCGA ACTGGAAAAC
CTGCTCGAAC GCGCGGCGAT CATGAGCCGT GAAGGGGTCA TCGACAGTGA GGTGATCGGC
ATGACCGGGC TCAAGGAGAA GCTGACGACG GTGGCCGATG TGGCTTCCTA CAAAGTCGAC
CTGGGTGATG AGAACCTGGA TGAACGGGAG CGCATCATCG CCGCACTCGA ACAGAGCGGC
TGGGTGCAGG CGAAAGCCGC ACGCCTGCTC GACATGACGC CGAGACAGAT CGCCTACCGT
GTCAAAATCC TGAATATCCA CATGAAACAC CTGTAG
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| Protein sequence | MVDRYTLIER ELDALYQVGQ VLNSTADLKG RLEGVLNVLH EQADLRSGMI ALREPETDAL
VLAVLRRGEA GRTSNEPVRY EPGEGLIGTI LEANCTIVVE RIADEPRFLG RLGLYDPELP
FIGSPIHVGK DELLGVLAAQ PSERELLGER ARFLEMVSNL VAQSVGLLRG MEQKQRDLTT
QCEQLQQTLR SNYGFENIIG RTPPMLRVFE TVRQVAKWNT TVLIRGESGT GKEMIASAIH
FNSPRASGPF VKLNCAALPE NLLESELFGH EKGAFSGAVN QRKGRFELAN HGTLFLDEIG
EISPAFQAKL LRVLQEGEFE RVGGIHTLKV DVRIIAATNR DLESAVEEGA FREDLYYRLN
VMPIQMPPLR QRKEDIPELA RFLLGRISRN QGGRLLEIKE SAIRSLMRHD WPGNVRELEN
LLERAAIMSR EGVIDSEVIG MTGLKEKLTT VADVASYKVD LGDENLDERE RIIAALEQSG
WVQAKAARLL DMTPRQIAYR VKILNIHMKH L
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