Gene MCA0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0625 
Symbol 
ID3102364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp661019 
End bp662272 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content55% 
IMG OID637169838 
Productcarbohydrate ABC transporter, ATP-binding protein, putative 
Protein accessionYP_113141 
Protein GI53805031 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACG CCATTCAGGC CGAATCCGTC GGCAAGTCCT TCATCCTCCA CCATCAGCGC 
AACCGCCCCA ACGACAGTCT ACGGGACGCC CTGGCCGGCT CGTTGTCTCA CCTCGGCCGG
TCGCTCCTCC GTCGGGATGA GACCGACCAG ACGGAAGAAT TCTGGGCACT GAAGGACATC
TCTTTTGGAA TCCGCCCAGG CGAGAGAATC GGGCTCCTGG GCCGGAATGG CGCGGGCAAA
TCGACCCTCC TCAAAATCCT CTCCCGCACG CTGGAACCTT CCACCGGAAG GATCAGAATC
CGGGGACGCA TCGCCAGCCT GCTCGAGGTG GGCACCGGTT TCCACCCCGA ATTGACAGGG
CGGGAAAACA TCTACTTCAA TGGCGCCATG CTCGGCATGT CGAAGGCCGA AATCGGCAGG
AAGTTCGACG AAATCGTCGA CTTCGCCGAG GTCGAACAGT TCCTCGATAC CCCGGTCAAG
CATTACTCGT CCGGCATGTA TGTCCGCCTC GGTTTTGCCG TCGCGGCCCA TATCGATCCC
GAGATTTTGA TCGTCGACGA AGTCCTCGCC GTTGGCGATG CCCGATTTCA GAAAAAATGC
ATTGGAAAGA TGCATGAAAT CAGTGAGGAA GGACGAACCT TGCTGTTCGT CAGCCATAAC
ATGCATTCCA TCATGCAATT GACACAGCGG GCACTGGTGC TCGACCGGGG CCAAATGGTT
TGCGATGCAG ATACTCGCGA TGCCGTCACC AAATATTTGA GCGCCGACGC CGGAGAAGAT
ATCAGTTTGC CAATGAGAAC CAAGGTAGAC TGGATTGACG ATGTAAATTT CCGTTGGTTA
CGCCAGGAAA CCGATATCGG CTTCAACAAG CCGCTCAATT TCCAATTTTG CTTCACCACT
GAGCAGCACA CCTCGCGGCT CGTTGTCACT ATCGGCTTCA TCAATACCAT TGGAGCGCTG
GTATTGACTT GCAAAGCCGA ACTGGACCAT CTCGAACCTG GGCCACAACA ATTTAGACTC
CGCATCAGCG ACCACCACCT GACACCAGGA ACCTATTTCG TCCGACTGGA TTTATGGGGT
TCCGACGAAC ATCTCCTGGA GCAGGATAAC GTTTGTACAG TCGATCTGTT TTCAGCAAGT
ACGGACGATC GTCTTATCCA GAGCATCGCG CGCCGCAGGG GAGACAAACT CGGATGCTAC
GCCCCCATTA CGCTTCAAAT TCTCCACGCG TCAGAAAGCC ATCAACACGA TTAA
 
Protein sequence
MSYAIQAESV GKSFILHHQR NRPNDSLRDA LAGSLSHLGR SLLRRDETDQ TEEFWALKDI 
SFGIRPGERI GLLGRNGAGK STLLKILSRT LEPSTGRIRI RGRIASLLEV GTGFHPELTG
RENIYFNGAM LGMSKAEIGR KFDEIVDFAE VEQFLDTPVK HYSSGMYVRL GFAVAAHIDP
EILIVDEVLA VGDARFQKKC IGKMHEISEE GRTLLFVSHN MHSIMQLTQR ALVLDRGQMV
CDADTRDAVT KYLSADAGED ISLPMRTKVD WIDDVNFRWL RQETDIGFNK PLNFQFCFTT
EQHTSRLVVT IGFINTIGAL VLTCKAELDH LEPGPQQFRL RISDHHLTPG TYFVRLDLWG
SDEHLLEQDN VCTVDLFSAS TDDRLIQSIA RRRGDKLGCY APITLQILHA SESHQHD