| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0576 |
|---|
| Symbol | mutS |
|---|
| ID | 3102732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 605298 |
|---|
| End bp | 607862 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637169791 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_113095 |
|---|
| Protein GI | 53805175 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0274453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC CATCCGACCT GTCCAGACAC ACGCCGATGA TGCAGCAGTA TCTGCGCATC
AAAGCGGAGC ATCCGGACCG GCTGCTGTTT TACCGGATGG GCGATTTCTA TGAATTGTTC
TTCGAAGACG CCCGGCGGGC GGCAAGGCTG CTGGACCTGA CCCTCACCAG CCGGGGCGAA
TCGGGCGGCG AACGCGTCGC CATGGCGGGC ATTCCTTACC ATGCGGTCGA CGGCTATCTG
GCGCGCCTCA TCCGGCTGGG CGAATCGGTG GCGATCTGCG AGCAGGTCGG CGATCCGGCC
ACCTCGAAAG GGCCGGTGGA GCGCAAGGTG GTGCGGATCG TGACGCCCGG CACGGTGACC
GACGAGGCGC TGCTGGAGGA GCGCCGCGAC AACCTGCTGG CGGCGGTTGC CCGCGATGGC
GCCGTGTTCG GGCTGGCGGT GCTGGATCTG TCCGGCGGGC GTTTCACTCT GCAACAGCCG
GGGTCGGTGG CGCAGCTCTT GAACGAGCTG GAGCGGCTGA ATCCGGCCGA GATCCTGGTC
AGCGAGGACG AACCGTTGAC GGAGGAACTG TCCGGACGGC GGGGTCTGAC CCGGCGTCCC
CCCTGGCATT TCGATCCGGA GAGCGGCCGC CGCCAGTTGC TGAGCCAGTT CGGCACCCAA
GACCTGGCGG GCTTCGGCTG TGAGCATCTG GGCCTGGCCA TAGGCGCCGC TGGCTGCCTG
CTGCAATACC TGCGCGACAC CCAGCGCAGC GCCCTGCCTC ACATCCGCAG CATCCGCGCC
GAGACCGGGA CGGAATATAT CGGCCTGGAC GCCGCCAGCC GCCGCAACCT GGAGCTGGAC
TGGCATCCTT CCGGCCGCGC CGAGTTCACC CTGCTGGGCC TCCTGGACCG CACCGGATCG
GCGATGGGCG GGAGGCTGCT GCGGCGCTGG CTGCATCAGC CTTTGCGCGA CCGGACGACC
CTCATGCTCC GCCAGCAAGC GATCGGCGAG TTGCTGGCGG ACCGCCGCTT CGAAGCTCTG
CACGACTTGC TACGCGGCGT GGGCGATGTC GAGCGGATCG CCGCCCGGAT CGCCCTCAAA
TCGGCCAGAC CCCGCGACCT GTCCACGTTG CGCCAGACGC TCAAGGCCCT GCCCGCCCTC
CGGGAGACCC TCCACGGTAC CGAAAGCGCA CTGCTGGGAG AACTGACGGG GCGCCTCGTC
GACCAGCCCG AGCTGAGCGA GCTGTTGCAA CGGGCCATCG TCGATGACCC GCCGCAGCTG
ATCCGCGACG GCGGTGTGAT CGCCGAGGGC TACCACGCCG AGCTCGACGA GCTGCGTCTC
CTGAGTGAAA ACGCCGACCG TTTCCTGGCC GAGCTGGAGG AAAAGGAGCG TGAGCACACC
GGGCTGGGTG CTCTCAAGGT CGGTTACAAC CGCGTGCAGG GCTTCTACAT CGAACTGCCG
CGGAGCCAGG CCGACCGGGC GCCGGTGCAT TACATCCGGC GTCAGACGCT GAAAAACGCC
GAGCGCTACG TCACGCCGGA GTTGAAGGCC TTCGAGGACA AGGTGCTGAG CGCCCGCGAA
AGAGCGCTGT CCTGCGAAAA AGCCCTCTAT GAGGCCTTAC TGGAAATACT GGGGCGCTGG
CTGCCCGCAC TGCAGGACTG CGCGGCGGGG CTGGCCGAAC TGGACGTACT GGCGAATCTG
GCGGAGCGCG CCGACCGGCT GAACTGGGTA GCGCCGCGAC TGGTGGACGC TCCGGGCATC
CGCATCATCG GCGGACGCCA TCCCGTGGTC GAGCAGGTCG GCGGCACACC GTTCGTGCCC
AATGACCTGG CATTCGGTCC GAACCGCCGC ATGCTGGTCA TCACCGGCCC GAACATGGGC
GGCAAATCGA CCTACATGCG GCAGGCCGCG ATCATCGTGC TGATGGCTCA CATCGGGAGC
CACGTCCCGG CGGCGGAAGC CGAAATCGGC CCGATCGACC GCATCTACAC CCGTATCGGC
GCTTCCGACG ACCTGGCCGG CGGCCGCTCT ACCTTCATGG TGGAGATGAC CGAGACCGCC
AACATCCTGA ACAACGCCAC GGCGGAAAGC CTGGTGCTGA TGGACGAAAT CGGCCGTGGC
ACCAGCACCT TCGACGGACT TTCGCTGGCC TGGGCCTCTG CCGAGCACCT CGCGCGGGAA
ACCCGCGCCT ATACGCTGTT CGCCACCCAT TATTTCGAAC TGACGGCATT GGCCGAGGAA
TGCGAGGACG TCGGCAACGT CCACCTGGAC GCCGTGGAGC ACGGCGACAA GGTGGTGTTC
CTGCATGCGG TCCGGGAAGG ACCGGCGAGC CAGAGCTATG GTCTACAGGT GGCGGCGCTG
GCGGGGGTGC CGCAGACGGT CATCGACAAC GCGCGGCGGA AACTGGAGCA GCTCGAACGG
CAGGCTCGGT CGGCGCATCA GCAGGCCGCA CCGGTGGCCC AGCTCGATTT GTTCCTGCCT
CCGGAGCCGC ACCCCGTGGT GCGGCGGCTC GAGTCCTTGG ACGTCGATGG GCTGAGCCCG
CGCGAGGCAC TGAATCTGCT GTTCGAGTTG AAACAGTCGC TGTGA
|
|---|
| Protein sequence | MPDPSDLSRH TPMMQQYLRI KAEHPDRLLF YRMGDFYELF FEDARRAARL LDLTLTSRGE
SGGERVAMAG IPYHAVDGYL ARLIRLGESV AICEQVGDPA TSKGPVERKV VRIVTPGTVT
DEALLEERRD NLLAAVARDG AVFGLAVLDL SGGRFTLQQP GSVAQLLNEL ERLNPAEILV
SEDEPLTEEL SGRRGLTRRP PWHFDPESGR RQLLSQFGTQ DLAGFGCEHL GLAIGAAGCL
LQYLRDTQRS ALPHIRSIRA ETGTEYIGLD AASRRNLELD WHPSGRAEFT LLGLLDRTGS
AMGGRLLRRW LHQPLRDRTT LMLRQQAIGE LLADRRFEAL HDLLRGVGDV ERIAARIALK
SARPRDLSTL RQTLKALPAL RETLHGTESA LLGELTGRLV DQPELSELLQ RAIVDDPPQL
IRDGGVIAEG YHAELDELRL LSENADRFLA ELEEKEREHT GLGALKVGYN RVQGFYIELP
RSQADRAPVH YIRRQTLKNA ERYVTPELKA FEDKVLSARE RALSCEKALY EALLEILGRW
LPALQDCAAG LAELDVLANL AERADRLNWV APRLVDAPGI RIIGGRHPVV EQVGGTPFVP
NDLAFGPNRR MLVITGPNMG GKSTYMRQAA IIVLMAHIGS HVPAAEAEIG PIDRIYTRIG
ASDDLAGGRS TFMVEMTETA NILNNATAES LVLMDEIGRG TSTFDGLSLA WASAEHLARE
TRAYTLFATH YFELTALAEE CEDVGNVHLD AVEHGDKVVF LHAVREGPAS QSYGLQVAAL
AGVPQTVIDN ARRKLEQLER QARSAHQQAA PVAQLDLFLP PEPHPVVRRL ESLDVDGLSP
REALNLLFEL KQSL
|
|---|
| |