Gene MCA0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0539 
Symbolorn 
ID3103318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp555152 
End bp555697 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID637169754 
Productoligoribonuclease 
Protein accessionYP_113058 
Protein GI53805219 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGG ACGCACAAAA CCTCATCTGG ATCGATCTGG AGATGACCGG GCTGGACCCC 
CAGAACGACG CCATCATCGA AATCGCCACC ATCGTCACCG ACGGCCAGCT CAACGTGCTC
GCCGAAGGCC CGGTGCTGGC CATCCATCAG CCGGAGTCGG TGCTGGACCG CATGGACGAC
TGGAACCGCA AGCAGCATGG CGAATCCGGG CTGACCGAGC GGGTGCGGCG CAGCACGATC
GGCGAAGCCG AGGCGGAGCA TCTGACGCTG GGGTTCGTCA GTGAATGGGT GCCGCCGAAC
GAATCCCCCA TCTGTGGCAA CAGCATCTGC CAGGACCGCC GTTTCCTCGC CCGCTGCATG
CCCCGCCTGG AGGCCTATTT CCATTACCGC AACCTCGACG TGTCGACGCT GAAGATCCTG
GTCGAGCGCT GGGCGCCCGC GCTCAAGGAA GGTCTGCAGA AGCAGAGCAC CCATAGGGCG
CTGGACGACA TCCGCGAATC CATCGCGGAA CTGCGGTATT ACCGCGACAC CGTGCTCAAG
ATCTGA
 
Protein sequence
MAQDAQNLIW IDLEMTGLDP QNDAIIEIAT IVTDGQLNVL AEGPVLAIHQ PESVLDRMDD 
WNRKQHGESG LTERVRRSTI GEAEAEHLTL GFVSEWVPPN ESPICGNSIC QDRRFLARCM
PRLEAYFHYR NLDVSTLKIL VERWAPALKE GLQKQSTHRA LDDIRESIAE LRYYRDTVLK
I