Gene MCA0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0340 
Symbol 
ID3102661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp340020 
End bp341930 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content66% 
IMG OID637169560 
Producthypothetical protein 
Protein accessionYP_112872 
Protein GI53802512 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG CCCTGTTCAA TCTCGTCCTG CGCGGCCTGG AAAAGCAGGT GCCGGCCACC 
GGCCTCGGCT TGTTCCGGCT GGCGTTCGGT CTGGTCGCAT TCCAGGAAAT CTGTTTCCTG
TATTACTTCC GCCAGCTGAT CTTCGATCCG GTGCCCTACC TGGACATCGC TTCGCCCTCG
GTCCATCTGT TCCTGGTGCT GTGGGCGATC GCCGCGCTGT GCCTGGCGCT GGGACTGTAC
ACCCGGCTCG CCGCCATCGC CAACTACCTG TTCTGGCTGG TGTTCACGGT GTTCACGCCG
ATGTGGAAGG ACTTCGACGG CGGCTTCGAC CAGCTCATGC TGGGATCGAG CCTGCTCTTG
ATCTTCCTGC CCTCGGAACG CGCCTGGTCG CTGGACCGGC TGCGCCTGGC CTGGCGCCAT
TCGACGGTGG ATCGGTGCTA CGCCCTGCCG CGGACGGTGC CGGTGCTGTG TTATTTCCTG
CCGCTGGCGG TGTCGCTCGG CTTCATCTAT TTCGATTCGG TGATCCACAA GCTGTTCGCC
GAGTTCTGGC GCAACGGCTT GGGGCCCTGG CTTCCGTCCT CGCTGCCTTA TTACATGTCG
CCGCTGGACA TGGGCTGGCT GCTGGAGATC GAGCCGCTGC AGCGGGCGAT CGGCTACACC
ATCATCGCGT TCCAGTTCGC CTTCCTGTTC CTGCTGTATT TCCGCCGCTT CCGCGTGCCC
CTGATGCTGG TCGGCCTATC GCTGCACGCG GGCATCATCG TGTCGCTGAA CATCTACCCG
TTCGGCTTCG GCATGCTGGT GCATTATTTC CTGATGGTGC CGTTCCGTTG GTGGCGGACC
CTCGGGCGAA CCCTGCGCCC GGCGGAGCCG GCGTTGCAGG TGTTCTACGA CGAGCGCTGC
CCGCTGTGCC TCAAGACCGT CCTCGCCATC GAGCATTTCG ACGTGTTCCG CGCCGTGGAA
TTCCGCGGAC TGCAGACCCA CGCCGCGACG GCACCCGCTC TCGAGGACAT TCCCGAACGG
GACCTGCTGG GCGATCTCTA CGCCGTCGAC CGCGAAGGGC GACGCTATTC GGGGGTGGCG
ACCTACGCCC GCATCCTGGT CGCCATGCGC TATCCAGCGC TGGCGGGACT GGCGATGCGG
CTGCCGGGCC TCGCTACGAT CGCCGACCGG GTCTACCGGC GTATCGCCGA CAACCGCGTC
CGGCTGGGCT GCGACGCGTC CTGCGCGCCG GCGCCGGGCC GGACGGAGCC CGACCTGGCC
CAGCGCATCG GCCGATGGGT CGGCGGCAGC CTGCAGCAGC GGGCCAACCG CATCAGCCGG
ATGCTGGTCG TCGTGCTGAT CCTGCAACTC AACTGCACCC TGCACTACGC CATCCTCTAT
CGACTGGGCG TGGACACCAA GGCCAACGAA GCCGGACAGG TGCTGACGAT GCTCAGCAAT
GCGCTGATTT CGGCCTCCCA CACGTTCTTG GGCATCACCC CGCATCCACT CTACCTGCAC
GACCATTTCC AGGGCTACGA GCACATACTG GGGATCGTCC ATCTCGACGC CGACGGCAAG
GAACGCTGGC TGCCGTTCGT GGACGAGGAG GGCCGGATCG TGTCGCCGAA CTGGGGCCGG
GTGCATTCCA TGTGGGCCAA CGTCGCGGTG ACCCGACACA TGGACCCACG CCGACTGGAC
AAATTCGTGC GCAAGGTGAC GGCGTTCTGG GGCACCCGCC TCGGGCTGGA TCTGAACCGG
ACCACGTTCG TGCTCAAGCT CAAAACGGTC AAAGCACCGA TGGACTGGGA GCCGGGCCTG
CGCCGGTACA ACCTCGCCCA ACCGTGGGAG GACGTCGGCC GGGCGGTGTG GCGCGACGGC
GAGATGCGGC TGGAGCTGGA CCGCGACCTG GAGGCGCTGA GCGCCGACTG A
 
Protein sequence
MQKALFNLVL RGLEKQVPAT GLGLFRLAFG LVAFQEICFL YYFRQLIFDP VPYLDIASPS 
VHLFLVLWAI AALCLALGLY TRLAAIANYL FWLVFTVFTP MWKDFDGGFD QLMLGSSLLL
IFLPSERAWS LDRLRLAWRH STVDRCYALP RTVPVLCYFL PLAVSLGFIY FDSVIHKLFA
EFWRNGLGPW LPSSLPYYMS PLDMGWLLEI EPLQRAIGYT IIAFQFAFLF LLYFRRFRVP
LMLVGLSLHA GIIVSLNIYP FGFGMLVHYF LMVPFRWWRT LGRTLRPAEP ALQVFYDERC
PLCLKTVLAI EHFDVFRAVE FRGLQTHAAT APALEDIPER DLLGDLYAVD REGRRYSGVA
TYARILVAMR YPALAGLAMR LPGLATIADR VYRRIADNRV RLGCDASCAP APGRTEPDLA
QRIGRWVGGS LQQRANRISR MLVVVLILQL NCTLHYAILY RLGVDTKANE AGQVLTMLSN
ALISASHTFL GITPHPLYLH DHFQGYEHIL GIVHLDADGK ERWLPFVDEE GRIVSPNWGR
VHSMWANVAV TRHMDPRRLD KFVRKVTAFW GTRLGLDLNR TTFVLKLKTV KAPMDWEPGL
RRYNLAQPWE DVGRAVWRDG EMRLELDRDL EALSAD