Gene MCA0316 details

Gene Information

• Locus tag: MCA0316
• ID: 3103358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 310664
• End bp: 311194
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637169537
• Product: TetR family transcriptional regulator
• Protein accession: YP_112849
• Protein GI: 53802379
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAG GCTACCACGG CACCGGACTG CAGGACATAC TGCACAGCGT GGGCGTGCCG 
AAGGGGTCGT TCTACAACTA CTTCACCAGC AAGGAGGAAT TCGGCGCCGA GGTGATCCGG 
CACTATATCG AGCCGTTCAT CCTGCAGCTC GACGGCCATC TCCGGAATTC CGCACTGAAC 
GGCGCCCAAG CCCTGCAGGC GTATTTCCAT ACACTGATCG GAGAAGCCGC CCGCCGGCAA 
TTCAAGGGTG GCTGCCTGCT GGGCAACCTG ATGGGCGAGA TCGGGGACAC CAGCGATACC 
TGTCGTGAGG CACTGCGGGA GGCGCTGCAC CGTTATCGGG ACAAGCTGGC GCAAGGCATC 
GCCCGTGCCC AGAGCGAAGG TGCGTTCCGG CGCGATCGGA CTGCCGAAGA CCTGGCCGAT 
TGCCTCGTCG ACGCCTGGCA GGGCGCCTTG CTGCGGATGA AGGTCGAACA GTCCGTCCGG 
CCGCTGGAAG AATGTTGCCG CAACCTGTTG GAGGGATATT TCCGAGCCTG A 

 

Protein sequence

MEQGYHGTGL QDILHSVGVP KGSFYNYFTS KEEFGAEVIR HYIEPFILQL DGHLRNSALN 
GAQALQAYFH TLIGEAARRQ FKGGCLLGNL MGEIGDTSDT CREALREALH RYRDKLAQGI 
ARAQSEGAFR RDRTAEDLAD CLVDAWQGAL LRMKVEQSVR PLEECCRNLL EGYFRA