Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0299 |
Symbol | |
ID | 3103066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 293402 |
End bp | 295261 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637169521 |
Product | methanol dehydrogenase protein, large subunit, putative |
Protein accession | YP_112833 |
Protein GI | 53802410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0065801 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC CCGTGAAAAG CTGGCTCATC GCAAGTTCCA TAGCATCGTT GCTGGCAGTA CCCGGGGTCT CTTTCGCGAA CGCTGAAGTG GAAGCACTCA CCAAGGATCC GAAGAACTTT GCGACTTGGG GTGGCAACTA CGCGGGCACG CGTTACAGCA CGCTGGACCA GATCAATTTC AAGAACGCCA AGCATCTGCA GCCGGTCTGG ACGTTCTCCA CGGGCATGCT GCGCGGCCAT GAAGGCGGTC CGCTCGTCGT CAACGACGTG ATCTACATTC ATACCGGGTA TCCCCACAAG GTCTACGCCC TCGATCAGGC GACTCAGTCC GTGATCTGGG AATATGTCTA TGCTCCCGAC AAGGGCACCG ATCAGTCACA GGTCATTTCC GTGATGTGCT GCGACGTGGT CAACCGCGGT CTGGCCTACG GTGACGGCAA GATCTTCCTG GCCCAGGGCG ACGCTACGCT GGTGGCCCTC GACGCCAAGA CCGGCAAGAT CGTCTGGAAA GTCAAGAACG GCGATCCGAA GACCGGCATG ACCGCCACCA ACGCCCCCCT GGTCGTCAAG GACAAGGTCC TGACCGGTAT CTCCGGTGGT GAATTCGGCG TGCGCGGCTT CCTGGCTGCT TATAACATCA AGGACGGTTC GCTGGTATGG AAGAAGTACA GCATGGGTCC GGATGACGAG GTCGGCCTGG ATCCCGAGCA CACCATGACC TGGACCGATG GCAAAATGGC GCCGGTCGGC AAGGATTCCT CGCTGAAGAC CTGGCAAGGC GACCAGTGGA AAATCGGCGG CGGTACCACC TGGGGCTGGT ACAGCTACGA CCCGGATCTG AATCTGGTTT ACTACGGTTC GGGCAACCCC AGCACCTGGA ACCCGGTGCA GCGTCCTGGC GACAACAAAT GGTCGATGAC CATCTGGGCT CGTGACGTCG ATACCGGTGA AGCCAAGTGG GTCTACCAGA TGACCCCGCA TGACGAATGG GACTATGACG GCATCAACGA AATGATGCTG ATCGACCAGG AAATGACCGC GAAGGACGGA TCCAAGCACT CCAAGCTGCT GACCCACTTC GACCGTAACG GCTTTGGCTA CACCCTGGAC CGCGTCACCG GCGAGCTGCT GGTGGCCGAG AAGTTCGACA AGGCCGTCAA CTGGGCGACT CACGTCGACA TGAAGACGGG CCGTCCGCAG GTCAATCCGA AGTACTCCAC CCAGCATGGC GGCCAGGACG TCGACACCAA GGGCATCTGC CCCTCGGCCA TGGGCGCCAA GAACGAGCCC CCGGTCACTT ACTCGCCGCG GACCAAGCTC ATCTACATCC CGGGTAACCA CACCTGCATG AACTATGAGC CGTTCGAGGT CGAATACACC GCAGGCCAGC CGTATGTCGG CGCCACGCTG AACATCTTCC CGGCCAGGGC CAACGTGAAA ACCGGCGAGA AGGAATCGAG CAACCACATG GGGTCCTTCA CCGCCTGGGA TCCGACCACC GGTACCATCG CCTGGCAGTT CGACGAACCC TTCTCGCTGT GGAGCGGCAT GGTTTCGACC GCCGGCGACA TCGTGATTTA CGGTACGCTG GAAGGCTACC TGAAGGTGCG CGATGCCAAG ACCGGTGAGG AACTGTACCG GTTCAAGACG CCGTCGGGCA TCATCGGCAA CGTCAGCACC TGGACCTACA ACGGCAAGCA GTACATCGGC GTGCTGTCCG GCATCGGTGG CTGGGCTGGC GTGGGCATGG CGGCCGGTCT GGAAGGTGAT ACCGAAGGTC TGGGTGCGGT GGGTGCCTAC AAGGGTCTGA GCAGCCATAC CAAGCTGGGT GGTGTGTTCA CCGTGTTCGC TCTGCCGTAA
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Protein sequence | MKKPVKSWLI ASSIASLLAV PGVSFANAEV EALTKDPKNF ATWGGNYAGT RYSTLDQINF KNAKHLQPVW TFSTGMLRGH EGGPLVVNDV IYIHTGYPHK VYALDQATQS VIWEYVYAPD KGTDQSQVIS VMCCDVVNRG LAYGDGKIFL AQGDATLVAL DAKTGKIVWK VKNGDPKTGM TATNAPLVVK DKVLTGISGG EFGVRGFLAA YNIKDGSLVW KKYSMGPDDE VGLDPEHTMT WTDGKMAPVG KDSSLKTWQG DQWKIGGGTT WGWYSYDPDL NLVYYGSGNP STWNPVQRPG DNKWSMTIWA RDVDTGEAKW VYQMTPHDEW DYDGINEMML IDQEMTAKDG SKHSKLLTHF DRNGFGYTLD RVTGELLVAE KFDKAVNWAT HVDMKTGRPQ VNPKYSTQHG GQDVDTKGIC PSAMGAKNEP PVTYSPRTKL IYIPGNHTCM NYEPFEVEYT AGQPYVGATL NIFPARANVK TGEKESSNHM GSFTAWDPTT GTIAWQFDEP FSLWSGMVST AGDIVIYGTL EGYLKVRDAK TGEELYRFKT PSGIIGNVST WTYNGKQYIG VLSGIGGWAG VGMAAGLEGD TEGLGAVGAY KGLSSHTKLG GVFTVFALP
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