| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0172 |
|---|
| Symbol | |
|---|
| ID | 3103434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 182469 |
|---|
| End bp | 183383 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637169395 |
|---|
| Product | Mce family protein |
|---|
| Protein accession | YP_112709 |
|---|
| Protein GI | 53802515 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGGG AAACCTATGC CCTGCTGACC GGCCTGTTCG TGGTCATTCT TGGCAGCGCG
CTGATCGGCA TCGCCCTTGT TCTTGGCGAC TATGGCACCG AACGCGACGT CTATGTGGTC
TCCACCCAGG GCGCGGTATC CGGCCTCAAC CCGGAATCCC TGGTCATCTT CCGTGGCGTG
CGGGCCGGCA AGGTGGCCTC GATCAGCTTC GCGCCCCACG ATCCCCGCAC CATCTTGGTC
CGGATCGAGG TCGACAAGGG CCTTCCGATC ACCCGCGGCA CCTATGCCAC GCTACGGGTG
CAGCCGCTTA CCGGCCTGGC CCAGATCGAT CTCAGCGACG AAGGCAACGA CCCGGAACCC
CTGCGCACCG ACCCCAGGAA CCCGGCCAAC ATCCCGCTGC GTCCCTCCCT CCTGGACAAG
CTGACCGGTT CGGGGTCGGA CATCCTCACC CAGATTGCCC AGCTCACCAG CCGGCTGAAT
GCCCTCCTCG ACGACGGCAA CCGCCAGCGG ATCGCGCACA CCCTGGAAAG CCTGGACACG
GCGGCGGACG AACTGGTCCG CCTGGAACGG TACATCGAAG AGGGGCTGGA ACGCATCCCC
ATCCTGGACG GCAGACTGAG GCAGGCGCTC GCGGACCATT CTGCCATGGC CCGCGACGTC
CGCGAAACCT CCCGCCAGGT CCGGGCACTG AGCGAAAGCG CACAAAAGGT CGTGGACATC
GGAGCAGCCG CGAGCGATAC CCTGATCCGC AGCCGGCTGC CGGAACTGGA CGCGCTGATC
GACGACGCGG CTCACACCGC GGCCAGTCTG CGCCGACTGT CGAAAACACT GGAACGAGAC
CCGCAGACCC TGCTGCTGGG ACCGGCGCCG GGTCTCCCAG GCCCGGGGGA GCCGGGATTT
CAGGAGCCGA AATGA
|
|---|
| Protein sequence | MVRETYALLT GLFVVILGSA LIGIALVLGD YGTERDVYVV STQGAVSGLN PESLVIFRGV
RAGKVASISF APHDPRTILV RIEVDKGLPI TRGTYATLRV QPLTGLAQID LSDEGNDPEP
LRTDPRNPAN IPLRPSLLDK LTGSGSDILT QIAQLTSRLN ALLDDGNRQR IAHTLESLDT
AADELVRLER YIEEGLERIP ILDGRLRQAL ADHSAMARDV RETSRQVRAL SESAQKVVDI
GAAASDTLIR SRLPELDALI DDAAHTAASL RRLSKTLERD PQTLLLGPAP GLPGPGEPGF
QEPK
|
|---|
| |