| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0148 |
|---|
| Symbol | |
|---|
| ID | 3102338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 154610 |
|---|
| End bp | 155443 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637169372 |
|---|
| Product | capsular polysaccharide export protein, putative |
|---|
| Protein accession | YP_112686 |
|---|
| Protein GI | 53802564 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | [TIGR03028] polysaccharide export protein EpsE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.181094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGGA AGATTAGTTC CGGCGTGAAA GCGGCGTGGT GCCGCATCGC TTTGGTCATG
GGGCTGATGG CCGGTTGGGG GGCCGTGGCT GGCGATGCGC CCTTGCACGA GGCGGGCGAC
TACCGGCTCG GACCGGGAGA CGTGGTGAGG ATCAGCGTGT TCAACTATCC CGAGCTGGCC
ATCGAAACCC GGATCAGCCA GACCGGGAAC ATCACGTTTC CGCTCACCGG TCCCATCGCC
ATCGGAGATT TGACGGCCGC CGAAGCGGAA GGGCGCATCG CCGGCAAGCT GCGCCAGGGC
GGATACATCA GCGATCCGCA TGTCACCGTG GTGGTCTCCC AGTTCAAGGC GAGGGAGGTC
GCAGTGATGG GACAGGTCAG GAATCCCGGC AAGTACCCGA TCGAGAGGCA GAGCCGGGTG
TTGGACATGC TGGCCGCCGC CGGCGGGGTG ACGACGGCCG ATGCGGGCGA TACGGCGACG
CTGCTGCGTG CCAATGGCGA GAAGCTCGTC ATCGATCTCA ATGCCTTGTT CGAGGGAAGC
CCCGGTCAGA ATCCCGAGGT GGCGGCCGGC GACACGCTCT TCGTTCCGAA GGCGCCGCAG
TTTTATGTCT ATGGGGAAGT TCAGCGGCCC GGCGCCTACC GGCTTCAGCG AGGCATGACG
GTCAGCCAGG CGATTTCCGC CGCCGGCGGA CTGACGCCCC GGGGGACCGA CACCTGGCCC
GCGCCGATCG TCAAGCGGCG CGACGCCAAC GGGGTGGAGC AGGAGACGAC GGTGGACGGT
TCTTATGCCC TGCAGCCGGA TGACGTGCTG TATCTGCGCG AGCGGTGGTT CTGA
|
|---|
| Protein sequence | MPGKISSGVK AAWCRIALVM GLMAGWGAVA GDAPLHEAGD YRLGPGDVVR ISVFNYPELA
IETRISQTGN ITFPLTGPIA IGDLTAAEAE GRIAGKLRQG GYISDPHVTV VVSQFKAREV
AVMGQVRNPG KYPIERQSRV LDMLAAAGGV TTADAGDTAT LLRANGEKLV IDLNALFEGS
PGQNPEVAAG DTLFVPKAPQ FYVYGEVQRP GAYRLQRGMT VSQAISAAGG LTPRGTDTWP
APIVKRRDAN GVEQETTVDG SYALQPDDVL YLRERWF
|
|---|
| |