| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0147 |
|---|
| Symbol | |
|---|
| ID | 3105023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 153160 |
|---|
| End bp | 154554 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637169371 |
|---|
| Product | polysaccharide biosythesis protein, putative |
|---|
| Protein accession | YP_112685 |
|---|
| Protein GI | 53802565 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.709733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA CTGGCGCTCC TTCGGTTTTT GAAAGCCCTC TGGTTTTTCT GCTCAAGACG
CTGTTCGCGC CGGTGGTCGC TTCCGGGGTA TTTCTGGCAA GCCTTAGATT CGAAGGATAT
CCGCTGGAGG GAGCGAACAT CCTGATGTTT TTTCTGGTAT TCATCGTCGT CTCCCACACC
TTCAAGGTGA CGCGGTTGAA CGACAGGCTG ACCGCGCGTT CTTTTTTCGA GACGGCGTTC
GATACCATGG CGAGATGGAT TTTTACGCTG GCGGTGGTCG CTTTGCTGAC TTATGTCGCC
GGTATCGAGG ACTTTTTGGA CGAACCCGGT TTCGTGGTTT GGGCGGGCGC GACGCCATTC
ATCCTGCTGT TCGGGCAGCT TGCGGTCGGG CCGATGGTCA GGATCTATTT CCGTCGGTAT
GGCGGCCATC GCAAGGCGGT GATCGTCGGA GTGACGGAAA TGGGGGTGAA ACTGGCGGAA
GCGATCGGGA GCCACGCCTT CCTGCGCACG GACGTGCTCG GGTTTTTCGA GGACAGGCCG
GCGGACCGCA CCGCGGATCC CGGCGATCTG CCGGTGCTCG GGCGTACCGC GGATTTGCCC
GCGTTTCTCC GGCAACATGA GGTGCATGCG GTCTACATCA CCTTGCCCAT CGCCCGCCAG
CCGCGCATCC TCGAGTTGCT GGACAATCTG AAGGATTCGA CGGTCTCGGT GTATTTCGTT
CCCGATCTGT TCATGACGGA CCTGCTGCAA GCTCGCTGGG ATACGCTGGC CGGTATTCCG
GTGATGGCGG TCTGCGAATC GCCTTTCATC GGGATACGGG GTTTGAGCAA GCGCCTGATG
GACATCGTGG GCGCCACGGT GGCGCTGGTG TTGCTGGCGC CGGTCATGCT GGTGATCGCT
CTGGCGGTAC GGTTGTCGTC GCCGGGGCCG GTGTTGTTCA AGCAGCGGCG CTACGGCGAG
CCGATTTTCG TCTACAAGTT CCGCAGTATG ACGGTTTGCG AGGATGGCGG CACGGTGACC
CAGGCGAAAC AGGGGGATGC CCGGGTGACG CCCTTGGGCG CGATTCTGAG AAGGACCTCT
CTGGACGAGT TGCCCCAGTT CTTGAACGTG TTGCAGGGCA CCATGAGCCT CGTGGGACCA
CGTCCCCATG CGGTTGCGCA CAACGAGCTT TACCGGGGGC TGATCAAGGG TTACATGGTG
CGCCACAAGG TGAAGCCGGG TATCACCGGC TGGGCGCAGG TCAACGGCCT GCGGGGCGAG
ACCGAGACGG TCGAGAAGAT GGCGGCGCGC ATCAGGTACG ATCTGGAGTA CCTGCGCAAC
TGGTCGCTCT GGCTGGACAT GTGGATCTTG CTGAAGACCG TCGGCGTGGT CTTGAAGCAG
AAGAACGCCT ATTGA
|
|---|
| Protein sequence | MNQTGAPSVF ESPLVFLLKT LFAPVVASGV FLASLRFEGY PLEGANILMF FLVFIVVSHT
FKVTRLNDRL TARSFFETAF DTMARWIFTL AVVALLTYVA GIEDFLDEPG FVVWAGATPF
ILLFGQLAVG PMVRIYFRRY GGHRKAVIVG VTEMGVKLAE AIGSHAFLRT DVLGFFEDRP
ADRTADPGDL PVLGRTADLP AFLRQHEVHA VYITLPIARQ PRILELLDNL KDSTVSVYFV
PDLFMTDLLQ ARWDTLAGIP VMAVCESPFI GIRGLSKRLM DIVGATVALV LLAPVMLVIA
LAVRLSSPGP VLFKQRRYGE PIFVYKFRSM TVCEDGGTVT QAKQGDARVT PLGAILRRTS
LDELPQFLNV LQGTMSLVGP RPHAVAHNEL YRGLIKGYMV RHKVKPGITG WAQVNGLRGE
TETVEKMAAR IRYDLEYLRN WSLWLDMWIL LKTVGVVLKQ KNAY
|
|---|
| |