Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0129 |
Symbol | apbE |
ID | 3102831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 134125 |
End bp | 135210 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637169354 |
Product | thiamin biosynthesis lipoprotein ApbE |
Protein accession | YP_112668 |
Protein GI | 53802603 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.791974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTCC CGATTCTGCG CCGTTTCGGC GGACTCCTCC TCGGCGCCAC GCTCGTTGCC TGCCAGACCG GGGAAGACGA AACCCTGCTC TCGGGCGACG TGCAGGGGAC CACTTACCAC ATCAAGATGG TGCTGGACGG CCTGCCGGCC GACCAGACCG AATTGAAGCA AGCCGTGGAT GCCGTCTACG ACGACATCGA CCTCAAGCTA TCGAACTACC GGGAAGATTC GGAAATCTCC CGTATCAACC GCGCAGCCAC GACCGACTGG CTGACCGTTT CGCCCGAGAT CGCCGAGCTG GTCGACATCG CCCGCCAGGT GCATGACAAG ACCGACGGCT GTTACGACCT GACGGTCAAA CCCCTGTTCG ACCTGTGGGG CTTCTCGCGC CATCAGACCC GCGTGCCGAC CGACGCCGAA ATCGCCGCGG TGCTGCCTCA CATCGGCATG GACAAGCTGG AAGTGGACGT TCCCGGCCGG CGCCTGCGCA AAAAGGATCC AGCGCTTCGC ATCGACCTGT CCTCCATAGC CCAGGGCTAC ACCGTCGGCC GGGTAGCCGG CCTGCTGGAA GCAAAGGGCA TCCAGAACTA CCTGGTCGAG GTCGGCGGAG AGATGCAGGT CAAGGGCCGC AAGGCCAACG GCAAACCCTG GCGCGTCGCC GTGGAAAAAC CCACGCCCTA TACCCGGGAA GTCGAACGGA TATTGGATGT CCACCAGACG GAGGGGACCG CCATCATGAC CTCGGGCACT TATCGCAATT TCTTCGAGGA GGGAGGCAAG ACCTACTCGC ATATCCTCGA TCCCAGGACC GGCCGGCCCG TCGACCATCA TTTGCTGTCG ACCACGGTGC TTCATCCCGA CCCCACGTGG GCGGACGCGT GGTCCACCGC ATTGCTTTGC CTGGGCGAGC AAAAGGGTTA CGCCATCGCT GAACGGGAGC GGCTCAAGGC ATTGCTGATC TACGGCGAAA ACGGCGGGCT GAAAGAGCGG TTTACTCCGG CCTTCGGCGC CGAAATGCCA ATGGCGACGA GGCCGGCCTC GCCCCTTTCG ACCCGGGCCC CCGCCGCGGT AACCGAGACG CGCTAA
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Protein sequence | MTLPILRRFG GLLLGATLVA CQTGEDETLL SGDVQGTTYH IKMVLDGLPA DQTELKQAVD AVYDDIDLKL SNYREDSEIS RINRAATTDW LTVSPEIAEL VDIARQVHDK TDGCYDLTVK PLFDLWGFSR HQTRVPTDAE IAAVLPHIGM DKLEVDVPGR RLRKKDPALR IDLSSIAQGY TVGRVAGLLE AKGIQNYLVE VGGEMQVKGR KANGKPWRVA VEKPTPYTRE VERILDVHQT EGTAIMTSGT YRNFFEEGGK TYSHILDPRT GRPVDHHLLS TTVLHPDPTW ADAWSTALLC LGEQKGYAIA ERERLKALLI YGENGGLKER FTPAFGAEMP MATRPASPLS TRAPAAVTET R
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