| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0115 |
|---|
| Symbol | hemN |
|---|
| ID | 3102860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 121147 |
|---|
| End bp | 122544 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637169340 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_112654 |
|---|
| Protein GI | 53802626 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC AGAACACCGC CCTCCGCGTG GAATGGGATC CCGCGCTGAT CCGCAAATAC
GACCGCAGCG GCCCGCGCTA CACCTCCTAT CCCACCGCCG ACCGCTTCGT GCCCGACTTC
AACGCAGCCC GCTACGAGGA ATGGCTGCAC CGGCGCGCGG CCGAGGCGAA TCCTTCGCCG
CTGTCGCTGT ATTTCCACAT CCCCTTCTGC CAGACGGTCT GCTTCTACTG CGCCTGCAAC
AAGATCGTGA CCGCCAACCG CGAGCACGCC GGCAAGTACA TCGACTACCT GGAAAAGGAA
ATCGAACTGC AGGCCAGACA CCTGGGGCCG CATCGTGAGG TACGCCAACT GCACTGGGGC
GGCGGCACGC CGACCTTCCT GAACCACGCA CAGATGCGCC GGCTGATGGA AGCGACGCGC
GAGCATTTCG AGCTGGCCGA GGGCGAGTAC TCGATCGAAA TCGACCCGCG CAAGGTGGAC
GCGGCCACCA TCGCCCTGCT GCGCGAAATC GGCTTCAACC GGATGAGCTT GGGCGTGCAG
GACTTCGACC CGGCGGTGCA AAAGGCCGTC AACCGCATCC AGAGCGAAGA GGAGACGCTG
CGCGTCCTCA CCGCCGCCCG CGCCGAAGGC TTCTGCTCGG TCAGCATCGA CCTGATCTAC
GGCCTGCCCA AGCAGTCGGT GAGCGGCTTC CGCCACACCC TGGACCGCAT CCTGGCCGCC
GATCCGGACC GGATTTCACT CTACAACTAC GCCCACCTGC CGCATTTGTT CAAGCCACAG
CGCCAGATCC GCGACGAAGA CCTGCCCAGC GCCGATACCA AGCTGGAAAT CCTGCAAGAT
GCGGTCGCCC ACCTGACCGG CGCCGGCTAC GTCTACATCG GCATGGACCA TTTCGCCAAG
GCGGACAACG AGCTCAATCT GGCCCAGCGC GAAGGCCGTC TGCAGCGCAA CTTCCAGGGC
TACTCGACCC ACGCCGACTG CGACATGGTC GCCCTGGGCG TCACCGCCAT CGGCAAGGTC
GGGCCGACCT ACAGCCAGAA TTTCCGCACC CTGGAGGACT ACTACGCCCG GCTCGACCAG
GGCGTGCTGC CGGTGATGCG CGGGCTGGAA TGCGATGACG ACGACCTGCT GCGGCGCGCC
GTGATCCAGG CACTAATGTG CCAATTCGAG CTGGACTTCG TCCGGCTCGG CCGACAGCAT
GGGGTGGATT TCCCCCGCTA CTTCGCCGCC GAACTGGACG ACCTCGAACC GATGGCGGCG
GACGGACTGC TGGAGCTGGG GCCGGACCGC CTGACGGTCA CCCCCAAGGG GCGGTTCCTG
ATCCGGAACA TCGCCATGGC TTTCGACCGC TACCTGCGCC AGGACCGGGA GCGGCGGGCC
TATTCCAAGG TCATCTGA
|
|---|
| Protein sequence | MNRQNTALRV EWDPALIRKY DRSGPRYTSY PTADRFVPDF NAARYEEWLH RRAAEANPSP
LSLYFHIPFC QTVCFYCACN KIVTANREHA GKYIDYLEKE IELQARHLGP HREVRQLHWG
GGTPTFLNHA QMRRLMEATR EHFELAEGEY SIEIDPRKVD AATIALLREI GFNRMSLGVQ
DFDPAVQKAV NRIQSEEETL RVLTAARAEG FCSVSIDLIY GLPKQSVSGF RHTLDRILAA
DPDRISLYNY AHLPHLFKPQ RQIRDEDLPS ADTKLEILQD AVAHLTGAGY VYIGMDHFAK
ADNELNLAQR EGRLQRNFQG YSTHADCDMV ALGVTAIGKV GPTYSQNFRT LEDYYARLDQ
GVLPVMRGLE CDDDDLLRRA VIQALMCQFE LDFVRLGRQH GVDFPRYFAA ELDDLEPMAA
DGLLELGPDR LTVTPKGRFL IRNIAMAFDR YLRQDRERRA YSKVI
|
|---|
| |