| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0081 |
|---|
| Symbol | slyD |
|---|
| ID | 3103555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 85182 |
|---|
| End bp | 85664 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637169306 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
|---|
| Protein accession | YP_112620 |
|---|
| Protein GI | 53802701 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.81622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCT CTCCCCACAA GGTTGTCCTC ATCCACTATA CCCTAACCAA CGACGAGGGA
GACGTTCTCG ACAGCTCCAG CGCGGACGAG CCGCTGGCTT ACATCCACGG GATGGGCAAC
ATCATCGCCG GCCTCGAGGA TGCGCTGACC GGCCGGGTGG TCGGCGACAG CTTCAACGTT
ACCATCCCCC CGGAGGAGGC CTACGGTCTG CACGACGAGA ACCTGGTCCA GGCGGTACCG
CGGCACGCCT TCGAGGGCGT CGACGAAATC CTGCCGGGCA TGCAGTTCCA TGCCGAGTCC
AACGAAGGCA TGCAGATCGT GACGGTGCTG GAAGTGCTGG AAGACGAGGT GGTGCTGGAC
GGCAACCATC CCATGGCCGG CATGACCCTG CATTTCAACG TCGAAGTCGC CGGCATCCGC
GATGCCACGC CCGAAGAGCT CGAACACGGC CACGTCCATG GTCCCGGCGG TCATCACCAC
TGA
|
|---|
| Protein sequence | MQISPHKVVL IHYTLTNDEG DVLDSSSADE PLAYIHGMGN IIAGLEDALT GRVVGDSFNV
TIPPEEAYGL HDENLVQAVP RHAFEGVDEI LPGMQFHAES NEGMQIVTVL EVLEDEVVLD
GNHPMAGMTL HFNVEVAGIR DATPEELEHG HVHGPGGHHH
|
|---|
| |