Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0079 |
Symbol | |
ID | 3104472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 80931 |
End bp | 84017 |
Gene Length | 3087 bp |
Protein Length | 1028 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637169304 |
Product | AcrB/AcrD/AcrF family protein |
Protein accession | YP_112618 |
Protein GI | 53802703 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.60921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGCG CCTTGGTCCG CTTCGCGGTG TGCCGCAGCG GTGTCGTGAT CGCGCTCGCG GTGCTGCTGG CGGCCTACGG CCTGTACCGT GCAGCGACGG CGAAACTAGA CATCTTTCCC GAATTTTCCG CCAAGCGGGT GGTGGTGCAG ACCGAAGCCC CGGGCCTCAC CACCCGGCAG GTCGAGATCC TCCTGACCCT ACCCATCGAG CGAAAGCTGG CCGGCATCGT CGGACTGGAA ACCCTGCGCT CGGAGTCGAT CCAGGGCTTG TCGGTGGTAA CGGCGGTATT CGCCGAGGAA ACCGACATCT ACCGCGACCG GCAACTGGTG AGTGAACGCT TGGCGCTGCT GGCCGGTCAG CTTCCGGAAG GCGCGGGGAC GCCGGTCCTG GTGCCGTTGT CCTCCTCCTC GGCGACGGTG CAGACGTTCG GCTTGACTTC GGAGACCCTC GGCCCCATGG AACTGCGGAC GCTGGCGGAC TGGGTGATGA CGCCGCGCCT CCTCGCCGTG CCGGGAGTCG CCGACGTCAA TGTCTTCGGT GGCGCAGTAC AGCAGTTGCA GGTGGAAGTC GATCCCGCAC GGCTCAAGCG CTTCGGTCTC GACCTCAACG CCGTGAGCCT GGCGGTGCGC CAGTCGTTCC GCACCCAGGG CGCCGGCTTC GTGGAGAACG AGAACCAGCG TTTGGCCCTT CAGGTCACGG GCCTCCCGCT CGGTCCGGAA AGCCTCGGCA ACGTCATCCT CAACCGTTCG CCCGGCGCGG TGCTCAAGCT GCGGGACGTC GGGACGGTCC GTTTCGGGCC CAGGCCGCCG ATCGGCGCGG CCGCGGTCAA TGGCGCCGCC GGGATCGTCA TGATGGTGAT CGGCCAGTAT GGCGCCAACA CCCTCGAGGT ATCGCGCGGC GTGGAACGCG GCCTGGCGGA ACTCGCCCCG ATGCTCGCCG CACGAGGCGC GACACTGCAT CCCAGACTGT TCCGCCCCGC CGACTATATC GAGCGGGCTC TGGACAACCT CGGCGCTCAC CTGCTGGCGG GCGGGCTGCT GGTGATGGCG GTACTCTACG CCTTCCTGTA TGACCTTCGC ACCGCTCTGA TCTCGGCAGT GGCGATCCCG CTTTCACTGC TGGGCGCCTT CGTGGTGCTC CAGGCTTTCG GTGTCAGCCT GAACCTCATG GTGCTGGGAG GACTGGCCAT CGCCTTGGGC GAAGTCGTCG ACGACGCCAT CATCGACACC GAGAACATCT TCCGGCGACT GCGGGAAAAC CGCGCCACTG CCGCCCCCCG CCCCGCGCTC ACGGTCGTTT ACGAGGCATC ACTGGAAGTC CGCGGGTCGG TGGTCTACGC CAGCTTCATC GTGGCCCTAG TATTCCTGCC GCTGCTGGGA TTGGGCGGCG TCGCCGGCCG TCTGTTCGCG CCGCTCGGCT ACGCCTACAT CATCGCCATC CTGATCTCGC TGGCGACCGC ACTGACGGTC ACGCCTGCGC TTTGCGTCGC CCTGCTGACA GGTTCGAAAG AGGCGGCGGA AACGCCGCCG CTGATCCGCT GGCTGCAACC GCTTTATGGA CGCTGGCTGC GGTGGGCCGC GAGGCAGCCG GCCCGGCTCG CGGCCGGCAG CCTCGCGGCC TGCCTTCTGG CGACCGCGTT GGCCCCTGGG CTGGGCGGGG ACTTCCTGCC GCACCTGCGC GAGGGGCACT ACATCGTGCA CACCACGAGC CTGCCCGGCA CCTCGCTGCA GGAATCACTG CGCCTTGGCG GACTGGTCGT CCGCGAGATC CTGCGGATCC CCGGGGTGGA ATCCGTCTCG CAATGGGCGG GACGGGCCGA GCGCGGCGCC GATACCTACG GCAGCCATTA CAGCGAATAC GAGGTGCGCC TCCAACCGAT GTCCGGCAGC GGACAACAGA AGGTGCTGGA GCGGCTGCGC GGACTACTGG AGGGCTTCCC CGGGATACGG GCCGAGGTGA ACACCTTCCT CACCGAACGG GTCAACGAAA CGATTTCGGG CTACACCTCG CCGGTCGCAG TCAATCTGTA CGGTGACGAC CTGGATCTGC TGGACCGGAA GGCGCGCGAG CTCGCCGACG AAATCGGCAG GATGGCTGGA GCCACGGACG TGCAGCTGCG GTCGCCGCCC GGCTCGCCGC TGGCGGAAAT CCGGCTGCGG CCCGATCAGC TCCAGGTGTG GGGACTACGT CCGGGAGACG TCATGGATGC CGTCGACACC GCTTTCGCCG GCCGGACCGT CGGCCACTTC CCCCTCGGCC AGCGTATCGT CGAAACGTCC GTCATCCTCC GGCCGGATTT GCGGCAGTCG CTCGACAGCC TGCGCGAACT GCCGCTCAAA AGCCAGGACG GTACGCTCGT ATCCCTCGGC GAGGTGGCCG AAATCTCCGA AACCGGGGAT CGCTACAACA TCCTGCACCG CGGCGGCCGC CGCATCCAGA CCGTGACCGC TGGCGTCGAG GGACGCGACC TGGCCTCGTT CGTGGAGGAA TTGCGGGCCC GGTTGGATGC GGTGCTGGGA CGTTCGACCG GCGTCTATGC GGAAATAACC GGCGCCGCGA TGGAACAGGG CGTCGCCCGG CGCGAACTGA TCGCCCGCGC CTGCCTGGCT GGCGGCGGCG TGCTGGTGCT CACCTATCTC GCCATAGGCC GTTTACGCCA TACCGCCATC GTCCTGGCCA ACCTGCCGTT CTCACTGGCT GGGGGGGTGC TGGCAGCAGG GATTTCCGGC GCCAGCCTTT CGGTGGGCGC GCTGGTAGGT TTCGTGACTC TGTTCGGCAT CACCGTCCGC AACACCATCA TGCTGCTTTC GCATTACCGT CATCTGGTCG AGAGGGAAAG GCAGACATGG AATCTCGACA CCGCCGTGCG GGGTGCCCAG GAACGCCTGC CTTCGATTCT GATGACGGCG CTGGTGACCG CGCTGGCGAT GCTGCCCATC GCCAGCGGCA GCGACGACCC GGGACTGGAA ATCATGGGAC CGATGGCTGC CATCATCATC GGCGGCCTGC TGTCTTCCAC CTGCCTCAAT CTCGCGTTGC TGCCGGCAAT GCTGCTGCGC TGGGGAGGCT CTTTCGAAAA CCGGTAG
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Protein sequence | MLGALVRFAV CRSGVVIALA VLLAAYGLYR AATAKLDIFP EFSAKRVVVQ TEAPGLTTRQ VEILLTLPIE RKLAGIVGLE TLRSESIQGL SVVTAVFAEE TDIYRDRQLV SERLALLAGQ LPEGAGTPVL VPLSSSSATV QTFGLTSETL GPMELRTLAD WVMTPRLLAV PGVADVNVFG GAVQQLQVEV DPARLKRFGL DLNAVSLAVR QSFRTQGAGF VENENQRLAL QVTGLPLGPE SLGNVILNRS PGAVLKLRDV GTVRFGPRPP IGAAAVNGAA GIVMMVIGQY GANTLEVSRG VERGLAELAP MLAARGATLH PRLFRPADYI ERALDNLGAH LLAGGLLVMA VLYAFLYDLR TALISAVAIP LSLLGAFVVL QAFGVSLNLM VLGGLAIALG EVVDDAIIDT ENIFRRLREN RATAAPRPAL TVVYEASLEV RGSVVYASFI VALVFLPLLG LGGVAGRLFA PLGYAYIIAI LISLATALTV TPALCVALLT GSKEAAETPP LIRWLQPLYG RWLRWAARQP ARLAAGSLAA CLLATALAPG LGGDFLPHLR EGHYIVHTTS LPGTSLQESL RLGGLVVREI LRIPGVESVS QWAGRAERGA DTYGSHYSEY EVRLQPMSGS GQQKVLERLR GLLEGFPGIR AEVNTFLTER VNETISGYTS PVAVNLYGDD LDLLDRKARE LADEIGRMAG ATDVQLRSPP GSPLAEIRLR PDQLQVWGLR PGDVMDAVDT AFAGRTVGHF PLGQRIVETS VILRPDLRQS LDSLRELPLK SQDGTLVSLG EVAEISETGD RYNILHRGGR RIQTVTAGVE GRDLASFVEE LRARLDAVLG RSTGVYAEIT GAAMEQGVAR RELIARACLA GGGVLVLTYL AIGRLRHTAI VLANLPFSLA GGVLAAGISG ASLSVGALVG FVTLFGITVR NTIMLLSHYR HLVERERQTW NLDTAVRGAQ ERLPSILMTA LVTALAMLPI ASGSDDPGLE IMGPMAAIII GGLLSSTCLN LALLPAMLLR WGGSFENR
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