Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0055 |
Symbol | |
ID | 3103906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 55404 |
End bp | 57329 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637169281 |
Product | DedA family protein |
Protein accession | YP_112595 |
Protein GI | 53802750 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.381333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCCTGG AAGCCGTCCA TCTGTGGGTT GGCCAGCACC CGCATCTCGC TGGGCTGGCG GTGTTCGCCA TCGTTCTGGC CGAATCGCTC GCGGTCGTGG GCCTGCTGCT GCCCGGCACG GTCCTGATCT TTACTTTCGG TACGCTGGTG GGCGGCGGCT CGATGGATTT CGTCTCGACG TATGTCTGGG CATTGAGTGG CGCGCTCCTG GGGGATGGCA TCAGTTTCTG GCTGGGCTGG CGCCATCGTC AGCGGATCCG GACCGTCTGG CCTTTCAGCC GGTTCCCGGC GGTGCTGGAG CGGGGGGCCC ACTTCTTCCG GCGTTACGGC GGCCATGGCG TCCTGTTCGG CCGGTTCTTC GGCGCCGTGC GCGGTATCGT ACCCCTGGTG GCCGGCATGG CCGGCATGCC GGCAGGCCGC TTCGTCGGCT ACAGCGCCGT GGCGGCGGCC CTGTGGGTTC CCGTATTCCT GGCCCCGGGG GTCCTGTTCG GGGCATCGCT GGAACTGGCC TCGGGAACGA CGGCCCGGCT GGTCGGGCTC GGGCTCGGGC TCATCGCTTT GCTGTGGTTC GCGGTGTGGG CGACGGTGCG TGTCTATGCG TTCCTGCAGC CCAGAGCCCG CGACCTGATC CTGCTGATGT TCCGCATCGC CGGAGAGCAC CGTCTGCTCG GTCGCATCAC GCTGCCGTTG CTCGATTCCG AGCGGCGGGA CTACGGGGGG CTGGCGCTGG TCGGCGGTCT CATTTTCGCG GTGGTTTTCG CCCTGGGGCG GTCGCTCACG GTTCCTCCGT TGCCCGTTTC GTTCGCCGCA TGGCGCACGC CGGCGGCGGA TTACGGTTTC ACGGTGCTGG AGTCGTTGGG GAGCCGTGAA ACCCTGCTGA TCGGATTCGG CGTACTGGCG CTTTGGCTCG GCTTCCAGCG TTGGTTCGTC GCCCTTGCCC ACTGGTTGAT CGCGACGGTC TTCGCGCTGT CGTTGGGCTG GCTGGGAGAC CATGGGTTCG TCCTGCCGCC GTTCGATGGT CATGTGTTGC GTGGAGGCGT GGCGTCCGGC TTTGTCGCGG TTCTCGTGGC GCCGGTGTTC CGGAGGGTCG GGGGATGGGT GGCGTACGCG GCGGCGGCGG CGCTGGTCGC GGCCTTGGGA TTCGCCCGTA TTTACCTGGA ACACAGTGAA ATACCCCAGG TCCTGTTCGC CCTGGCGATC GGTCTGTCAT GGACGGTTCC GTTGGGAATC GCCTGCCGCA GGCATTGCGA AGCGAAGGCG GCATCGCCGG CTGTTGCGGC GCTGGTGACG GTTTGTCTGG CGCTGGTGCT GGCGGCCGCA GCCGTGCGGC ACGGTCCGGC GGAATTCATG CATGCCCCGC TCGTTCGCCG GATGACGACC GCCGAGTGGC TCGCGGACGG CTGGAAACGG CTGCCGGCTT ACCGGCTGCA GCCGTTGGGG CGGCCGCACC AGCCTTTGCC GATTCAGTGG GCGACCTCCC TGAATGGCGC GCGGGAGAAC CTCGAAAAGC TGGGCTGGCG GATGGCGGCG CCATTGTCCT GGCAGTCGGC GCTGCAATGG TTCAACCCGC GGGCGAAACC GGAGGAATGG CCGGTGCTGG CGCGTTTCAA CGAGGACAGC GAAGACGCCT TGCGCATGTT GCGGCCCGAA CACGGCGGGC GCTGGACGGT GCTGCGGCTG TGGCCGAGCC GGTTCGTGCT GGCGGAAGAC GGCGCCCCGC TTTGGGTGGG CAGGATAGAC CGGCTCGAAG CGGTCAACCG CTTCGGTTTC CTGGGCTATT TCCGGGAGGC GGGCGACTCG GACCGCATCG ATGCCGCGAT GCTCCTGGCG CCGGAGCGCA TCCCGGGGCT CGTTGCCACC CCGGTGATGC GGGATCCCGG ATCACCGGCG GTTCTGATCC GGGAGCGCTG GAAGCCGGTG CCTTAG
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Protein sequence | MSLEAVHLWV GQHPHLAGLA VFAIVLAESL AVVGLLLPGT VLIFTFGTLV GGGSMDFVST YVWALSGALL GDGISFWLGW RHRQRIRTVW PFSRFPAVLE RGAHFFRRYG GHGVLFGRFF GAVRGIVPLV AGMAGMPAGR FVGYSAVAAA LWVPVFLAPG VLFGASLELA SGTTARLVGL GLGLIALLWF AVWATVRVYA FLQPRARDLI LLMFRIAGEH RLLGRITLPL LDSERRDYGG LALVGGLIFA VVFALGRSLT VPPLPVSFAA WRTPAADYGF TVLESLGSRE TLLIGFGVLA LWLGFQRWFV ALAHWLIATV FALSLGWLGD HGFVLPPFDG HVLRGGVASG FVAVLVAPVF RRVGGWVAYA AAAALVAALG FARIYLEHSE IPQVLFALAI GLSWTVPLGI ACRRHCEAKA ASPAVAALVT VCLALVLAAA AVRHGPAEFM HAPLVRRMTT AEWLADGWKR LPAYRLQPLG RPHQPLPIQW ATSLNGAREN LEKLGWRMAA PLSWQSALQW FNPRAKPEEW PVLARFNEDS EDALRMLRPE HGGRWTVLRL WPSRFVLAED GAPLWVGRID RLEAVNRFGF LGYFREAGDS DRIDAAMLLA PERIPGLVAT PVMRDPGSPA VLIRERWKPV P
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