Gene MCA0039 details

Gene Information

• Locus tag: MCA0039
• ID: 3104088
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 40860
• End bp: 41498
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637169265
• Product: dihydroxyacetone phosphatase family protein
• Protein accession: YP_112579
• Protein GI: 53802783
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2376] Dihydroxyacetone kinase
• TIGRFAM ID: [TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGCCA CTCCCCACCT CATCCCTAGT GTCATCCAAG GCGCCGCATC GGCCATCCAG 
TCGCATGCCG AGGAGGTGAG CGCTCTCGAT CAGGCGATCG GCGACGGTGA TCATGTCGTC 
AACCTTCAGC GAGGGCTGGA GGCTTTGTCG CAGCAGGCGG AAAGTCTGGC GGCGCTGGAC 
TGGCCGGCGG CCTTGCAGAA GATCGGCATG ACCCTGATGG CGTCGGTGGG CGGGGCGTCG 
GGCTCGCTGT ACGGCACCTT GTTCATCGCC ATGGGCAAGG CCATGAAAGA CCGGGAAATG 
AACCTGGCGA ATCTGGCCGA GGCCTTCGGT CGGGGCGTGG AGGCGATGAA GGCGCGCGGC 
AAGGCGGATC GGGGCGAGAA GACCATGCTG GACGTGCTGA TCCCGGTGGC CGACGTACTG 
AAATCGGCGG CGGAGCATGC CATCGCTCCG GGGCAACTGG CGGAGGAGGT GAGCCGCGCC 
GCCGAGGCGG GCATGGAATC CACCCGCGAC ATGCTGGCCA CCAAGGGCCG CGCCTCTTTC 
CTGGGCGAGC GCGCCATCGG CCACGTCGAC GCCGGCGCCC GCAGCAGCCA GTTGATGATC 
TCGGCCATCG CCGAAGTCGT GGCGGAATCG GCCTGGTGA 

 

Protein sequence

MPATPHLIPS VIQGAASAIQ SHAEEVSALD QAIGDGDHVV NLQRGLEALS QQAESLAALD 
WPAALQKIGM TLMASVGGAS GSLYGTLFIA MGKAMKDREM NLANLAEAFG RGVEAMKARG 
KADRGEKTML DVLIPVADVL KSAAEHAIAP GQLAEEVSRA AEAGMESTRD MLATKGRASF 
LGERAIGHVD AGARSSQLMI SAIAEVVAES AW