Gene MCA0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA0038 
Symboleda 
ID3104233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp39904 
End bp40569 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID637169264 
Product4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase 
Protein accessionYP_112578 
Protein GI53802784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGCTA GGGCCCGTTC CTGCAACTGC AAGGAAAAAA CCATGAATCT GGATCAGATC 
ATCGAAGCCA CCAGCGTCAT GCCGGTGATG GTGGTGGACC GTCCCGAAGA TGCCGTGCCG
CTGGCCCGCG CCCTGGTCGA GGGTGGCATC CGCGTGCTGG AGATCACCCT GCGCACCGCC
GCCGGTCTCG ACGCCGTCAA GGCGATCCGC CGCGAGGTTC CCGATGCCAT CGTCGGCGTC
GGCACCATCG CCACCCCCGC CCAGCTCGAA GCCTCGATCG CCGCGGGTGC CCAGTTCGGG
GTTTCACCGG GCACCACGCC GACTCTGCTC AAGGCCATCG TCGACAGCAG GCTGCCGTTC
TTCCCCGGCG TTGCCACGAC TTCCGAGGTG ATGCAGGTGC TGGAGGGCGG GCTGACCGTG
ATGAAGTTCT TCCCGGCGGT GGCCGCCGGT GGTGTCAAGA TGCTGGAATC CTTCCGGGGT
CCGTTCCCGC AGGTGCGGTT CTGCCCGACC GGCGGCATCA ACGCCCAGAA CGCCCCGGAT
TTCTTCAAGC TCCCCAACGT GGTCTGCGTC GGCGGCTCCT GGCTGACCCC CAAAGACCTC
GTCGCCGCCG GCAACTGGGC GGAAATCACC CGCCTGGCGC GCGAGGCGGC CGCGCTCAAG
CCCTGA
 
Protein sequence
MSARARSCNC KEKTMNLDQI IEATSVMPVM VVDRPEDAVP LARALVEGGI RVLEITLRTA 
AGLDAVKAIR REVPDAIVGV GTIATPAQLE ASIAAGAQFG VSPGTTPTLL KAIVDSRLPF
FPGVATTSEV MQVLEGGLTV MKFFPAVAAG GVKMLESFRG PFPQVRFCPT GGINAQNAPD
FFKLPNVVCV GGSWLTPKDL VAAGNWAEIT RLAREAAALK P