Gene MCA0037 details

Gene Information

• Locus tag: MCA0037
• Symbol: edd
• ID: 3103171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 38085
• End bp: 39914
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637169263
• Product: phosphogluconate dehydratase
• Protein accession: YP_112577
• Protein GI: 53802793
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR01196] 6-phosphogluconate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCCTGC ACCAGACACT GGTCGACGTG ACCGACCGCA TCCGCGCCCG CAGCCACGAC 
CGCCGCGCCG CTTACCTCGA TCTCATGCAC CGCGCACGCC AGAAGGGTGT AGAGCGCTCT 
CACATCGCCT GCACCAACGT GGCCCATGCC TATGCGGCGA CCCCCGCCAA CGACAAGCTG 
GTGCTGAAGG CCGCGACCGT GCCGAATCTC GGCATCGTGA CCGCCTACAA CGACATGCTC 
TCGGCCCATC AGCCCTACGA GCGCTATCCG GAGATCATCA AGGACGAGGC GCGTCGGGCC 
GGCGTCACCG CCCAGGTCGC GGGCGGCGTG CCGGCGATGT GCGACGGCGT GACCCAGGGT 
CAGACCGGCA TGGAGCTGTC GCTGTTCTCG CGCGACGTGA TCGCGCTGTC CACGGCGGTG 
GCGCTGTCGC ATCGTGTGTT CGATGCCAAT CTCTATCTCG GCGTCTGCGA CAAAATCGTG 
CCGGGCCTGC TTATCGCCGC GCTGCGCTTC GGCCATCTGC CCGGCGTGTT CGTGCCGGCC 
GGCCCCATGG TGTCCGGCAT CTCGAATTCC GAAAAAGCCA AGGTGCGGCA GCAGTTCGCC 
GAGGGCAAGG TCGGCCGCGA TGCGCTGCTG GAGTCGGAAA TGGCTTCCTA CCACAGTGCC 
GGCACCTGCA CTTTCTACGG CACCGCCAAC AGCAACCAGA TGCTGCTGGA GATCATGGGG 
CTGCAACTGC CGGGCTCGTC CTTCGTCAAT CCCGGCACGC CGCTGCGCGA TGCGCTGACC 
CGTGCGGCGA CCCGTGTGGC GGTGGATCTG GCCCGGGATG CCACGGCGCC CGCCCTCTGC 
CATATCGTGG ACGAACGGGT GATCGTCAAT GCCATCGTCG GCCTGTTGGC GACCGGCGGC 
TCGACCAACC ACACCATCCA CCTGGTGGCC ATCGCCCGCG CCGCGGGGAT CGAGGTCAAC 
TGGGACGATT TCAACGATCT CTCGGCCGTG GTGCCGCTCC TGGCCCGCGT CTATCCCAAT 
GGCAAGGCCG ACGTGAACCA TTTCCACGCC GCCGGCGGCA TGGGTTTCCT GGTGCGGGAG 
CTGCTCGATG CCGGCCTGCT GCATGAGGAC GTGCAGACCA TCCTCGGTCC GGGGCTGCGC 
CGCTGGGCGG AAGAACCCTG GCTGGACAAC GGTACGCTGG CCTGGCGCGA TGCGCCTGAG 
AAGAGCCACG ATCCGGAGGT GCTCGCCCCG GCGGGCGAGC CGTTCAGTCC GGACGGCGGC 
TTGCGTCTGG TCACCGGCAA TATCGGCCGC GGTGTCATCA AGGTCTCGGC GGTGGCGCCG 
GAGAACCGGG TGGTGCGGGC GCCCGCCATC GTGTTCGAAA GCCAGGACGA ACTGATCGCC 
GCCTTCAAAC GCGGCGAGCT GGAGCGCGAT TTCGTCGCCG TGCTGCGCTT CCAGGGGCCC 
CGCGCCAACG GCATGCCCGA GCTGCATCAG CTCACGCCGG CCCTGGCCTC GCTGCAGGAC 
CGCGGCTTCA AGGTCGCCCT GATCACCGAT GGCCGTATGT CCGGGGCCTC CGGCAAGGTA 
CCGGCGGCGA TCCACATCTC CCCGGAGGCC GCCATGGGCG GCCCGCTGAC CCTGCTGCGC 
ACCGGCGACA CCATCCTGCT CGACGCCGTG CGGGGCAAGC TGGAAGCCGA GGTGCCGGCC 
GATCGCTGGG CGCTGCGTGA ACCGGTGACC GACGATCTGT CCGGCAACCG GTTCGGCTGC 
GGAAGGGAGC TGTTCAGCGG CTTCCGCCAT CTGGCCGATA CGCCGGAGCG CGGAGCTTTC 
ACTTTCAATT TCGACGACGG TGTCCGCTAG 

 

Protein sequence

MFLHQTLVDV TDRIRARSHD RRAAYLDLMH RARQKGVERS HIACTNVAHA YAATPANDKL 
VLKAATVPNL GIVTAYNDML SAHQPYERYP EIIKDEARRA GVTAQVAGGV PAMCDGVTQG 
QTGMELSLFS RDVIALSTAV ALSHRVFDAN LYLGVCDKIV PGLLIAALRF GHLPGVFVPA 
GPMVSGISNS EKAKVRQQFA EGKVGRDALL ESEMASYHSA GTCTFYGTAN SNQMLLEIMG 
LQLPGSSFVN PGTPLRDALT RAATRVAVDL ARDATAPALC HIVDERVIVN AIVGLLATGG 
STNHTIHLVA IARAAGIEVN WDDFNDLSAV VPLLARVYPN GKADVNHFHA AGGMGFLVRE 
LLDAGLLHED VQTILGPGLR RWAEEPWLDN GTLAWRDAPE KSHDPEVLAP AGEPFSPDGG 
LRLVTGNIGR GVIKVSAVAP ENRVVRAPAI VFESQDELIA AFKRGELERD FVAVLRFQGP 
RANGMPELHQ LTPALASLQD RGFKVALITD GRMSGASGKV PAAIHISPEA AMGGPLTLLR 
TGDTILLDAV RGKLEAEVPA DRWALREPVT DDLSGNRFGC GRELFSGFRH LADTPERGAF 
TFNFDDGVR