Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0027 |
Symbol | |
ID | 3102403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 28538 |
End bp | 29773 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637169254 |
Product | ISMca5, transposase |
Protein accession | YP_112568 |
Protein GI | 53802661 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0677305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGCA AGAAGAAACC GGCGGCAGCC GGCATGACGG CGCTGCCGTC TATTCCCCAC GAGCTCATTG AACAATTGAC CGGCGGCGCC ACGCCGATGA CGGCCGAACA GATCAACGCC ACCACCATGG CGCTGAAGAA AGCGCTGATC GAGCGTGCGC TGGGCGCAGA GCTGTCGTAC CACCTGGGCT ATCCGCCCGG CAGCGCCCGC CCCGAGGATG CAGCCAACCA GCGCAACGGC AAGTCCGCCA AGACGGTGCT GACTCAGGAC GGGCCGCTGC GCATCGAGGT GCCGCGCGAC CGCGCAGGCT CCTTCGAGCC CATCCTGATC CCCAAGCACG AGCGGCGTTT CACGGGCTTT GACGACAAGA TCGTGGCCAT GTACGCGCGG GGCATGACCG TGCGTGAGAT CCAGGGCTTC CTGGCTGAGC AGTACGGCAC CGAGGTCAGT CCTGAATTCA TCAGTTGTGT CACGGATGAG GTGATGGCCG AGGTCACCGC CTGGCAGGGC AGGCCGTTGG AGCCGATGTA CCCGGTCGTA TTCTTCGACT GTCTGCGGGT CAAGATCCGC GAGGATGCCG TGGTGCGCAA CAAGGCCATC TATCTGGCGC TGGGCGTGCT GCCCGACGGT ACGCGCGACA TCCTGGGCCT GTGGATCGAG AACACCGAAG GGGCCAAGTT CTGGATGAAG GTGTTCAACG ATCTGAAGAC GCGCGGCGTG GCCGACATCC TGATTGCCGT CACCGACGGG CTCAAGGGCA TTCCCGAGGC GCTTGGGGCG GTGTTTCCGG CCACGACGCT GCAGACCTGT ATCGTGCACT TGATCCGCAA CAGCCTGGAC TATGCCAGCT GGAAGGACCG CAAAGCGCTG GCTGCGGCGC TCAAGCCCAT CTACACGGCG CCCAGCGCAG AAGCCGCAGC GGTCGAACTC GATGCCCTGG AGGCTGGCCC CTGGGGGCAG AAGTTCCCCA CGGTGGTGGC GACCTGGCGC CGGGCCTGGG ACCGCGTCAT TCCGTTTTTT GCGTTCAGCC CGGCGGTGCG CAGAGTGATC TACACGACCA ATGCCATCGA GAGCCTGCAC AGTCAGCTGC GCAAGATCAT CAAGACGCGG GGGCACTTTC CCAATGACGA GGCCGCCACC AAGCTGCTGT GGCTGGCCTT GCGCAACATC ACGGCTGACT GGGGCCGAGC AGCCAGGGAG TGGAAAGACG CCATGAACCA GTTCGCCATC GCCTAG
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Protein sequence | MPSKKKPAAA GMTALPSIPH ELIEQLTGGA TPMTAEQINA TTMALKKALI ERALGAELSY HLGYPPGSAR PEDAANQRNG KSAKTVLTQD GPLRIEVPRD RAGSFEPILI PKHERRFTGF DDKIVAMYAR GMTVREIQGF LAEQYGTEVS PEFISCVTDE VMAEVTAWQG RPLEPMYPVV FFDCLRVKIR EDAVVRNKAI YLALGVLPDG TRDILGLWIE NTEGAKFWMK VFNDLKTRGV ADILIAVTDG LKGIPEALGA VFPATTLQTC IVHLIRNSLD YASWKDRKAL AAALKPIYTA PSAEAAAVEL DALEAGPWGQ KFPTVVATWR RAWDRVIPFF AFSPAVRRVI YTTNAIESLH SQLRKIIKTR GHFPNDEAAT KLLWLALRNI TADWGRAARE WKDAMNQFAI A
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