Gene MCA0013 details

Gene Information

• Locus tag: MCA0013
• Symbol: atpC-1
• ID: 3103663
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 10701
• End bp: 11123
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637169240
• Product: ATP synthase F1, epsilon subunit
• Protein accession: YP_112554
• Protein GI: 53802690
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATGA CGATGCATGT GGACATCGTG AGTGCGGAAG GCGAGATCTT CTCCGGGCAG 
GCCGAGCTGG TCGTGGCACC GGGCCAGGAA GGCGAGGTGG GCATCGCCGC CCGGCACGCG 
CCGTTCCTCT CGCCGCTCAA GCCGGGAGAG GTCAGGGTCA AGAGCGAGGG TCAGGAGCCG 
TTGTCGTTCT ACGTCTCCGG CGGCATGCTG GAGGTGCAGC CGTATCTGGT GACGATCCTT 
TCGGAAACCG CGGTGCGCGC GAAAGACATC GACGAAGCAG CGGCGCAGGA AGCCAAGCGG 
GCCGCCGAGG AAGCGCTGGC GGACCGCTCC GGCCGCATGG AATACGCCAA GGCCCAGGCG 
CAGCTGGCGG AGGCGGTGGC GCAGTTGCGG ACGCTGGAGA ATTACCGCAA GGGCCGGGCG 
TAA 

 

Protein sequence

MAMTMHVDIV SAEGEIFSGQ AELVVAPGQE GEVGIAARHA PFLSPLKPGE VRVKSEGQEP 
LSFYVSGGML EVQPYLVTIL SETAVRAKDI DEAAAQEAKR AAEEALADRS GRMEYAKAQA 
QLAEAVAQLR TLENYRKGRA