Gene MCA0008 details

Gene Information

• Locus tag: MCA0008
• Symbol: atpF
• ID: 3103660
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 5810
• End bp: 6283
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637169235
• Product: ATP synthase F0, B subunit
• Protein accession: YP_112549
• Protein GI: 53802695
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.320711
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACATCA ATGCCACGCT ATTTGGGCAA ATGGTCACAT TCGCGCTTCT GGTGTGGTTC 
ACCATGAAGT ACGTCTGGCC GCCCCTGTTG CAAGCGCTGG AAGAGCGCAA GAAAAAAATC 
GCCGAAGGTC TGGCTGCCGC CGAAAAAGGC AAGCACGAAA TGGAGCTTGC CGAAAAGCGT 
GCGACCGCCG CCTTGAAGGA GGCCAAAGAC CAGGCTGCGG AGATCGTGAA CCAGGCTCAA 
AAGCGCGCCA ATGCCCTGGT GGACGAATCC AAGGAAGCGG CCAAGATCGA GGGTGAGCGT 
ATCCTCGCCA ATGCCCGGTC CGAGATCGAC CGCGAGCTGG AGAATGCCAA GGAAGAACTC 
CGCAAACAGG TTTCTGCCCT GGCGATCAGT GCCGCCGAGA AGATCCTGCA GCGGGAGGTC 
GACCAGAAAA AGCACAAGGA AATCCTCGCC GGACTCGGCA AGCAGTTGGG CTAG 

 

Protein sequence

MNINATLFGQ MVTFALLVWF TMKYVWPPLL QALEERKKKI AEGLAAAEKG KHEMELAEKR 
ATAALKEAKD QAAEIVNQAQ KRANALVDES KEAAKIEGER ILANARSEID RELENAKEEL 
RKQVSALAIS AAEKILQREV DQKKHKEILA GLGKQLG