Gene MCA0001 details

Gene Information

• Locus tag: MCA0001
• Symbol: gidA
• ID: 3103716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 44
• End bp: 1921
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637169228
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_112542
• Protein GI: 53802710
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTTCG ACGATGAGTT CGACGTGATC GTGGTCGGCG GCGGACACGC CGGCACCGAG 
GCCGCCCTGG CCGCGGCGCG GACGGGTGCG CGCACCCTGT TGTTGACGCA GAACGTCGAG 
ACCCTGGGCC AGATGAGCTG CAATCCGGCC ATCGGCGGCA TCGGCAAGGG GCATCTGGTG 
AAGGAAATCG ATGCCATGGG CGGCCTCATG GCACGGGCGG CGGACCGGGC AGGTATCCAG 
TTCCGCATCC TCAACGCGAG CAAGGGGCCC GCCGTGCGCG CGACCCGGGC ACAGGCGGAC 
CGCAGCCTCT ACCGCAAGGC GGTGCGCGAG GGCCTGAGCG CCCAGGAAAA CCTCAGCCTG 
TTCCAGCAGA CCGTGGTCGA CTTGATCGTC GAAGGTCGCA GAGCGGCCGG CGTCGTTACC 
CAGATGGGCC TCAAGTTCCG TTCCCGCTGC GTGGTGCTCA CCGTCGGGAC GTTCCTGGCC 
GGACGCATCC ACATCGGCCT GGAAAACTAC GATGGCGGCC GGGCGGGCGA TCCGCCGGCG 
ACCGATCTGG CGCGGCGCCT GCGTGATCTG GGGTTCAAGG TCGCCCGGCT GAAGACCGGT 
ACCCCTCCGC GCATCGACCG CCGCAGCGTC GACTTCAGCC GGATGGCGGA ACAGCCGGGC 
GATGACCCCA CGCCGGTGTT TTCCTTCCTC GGCACGCGCG AGGAGCACCC GCCTCAGGTA 
TCGTGTTACA TCACCCGTAC CAACGAACGT ACCCATGAGC TGATTCGTGC CGGTCTCGAC 
CGGTCGCCGA TGTTCACCGG CGTGATTGAA GGCATTGGCC CGCGCTACTG TCCTTCCATC 
GAAGACAAGG TGGTGCGCTT CGCCGAGCGC GATTCACACC AGATTTTCGT CGAGCCGGAA 
GGTCTCGACA GCCTGGAAAT CTATCCCAAC GGCATTTCCA CCAGTCTCCC CTTCGACGTC 
CAGCTTGCCG TGGTGCGCTC GATCCAGGGG TTCGAGGACG CTCGGATCAC CCGCCCCGGC 
TATGCGATCG AATACGATTT CTTCGACCCG CGGGACCTCC GTCATTCGCT CGAGACACGT 
CACATGGAGA ACCTGTTTTT CGCCGGCCAG ATCAACGGCA CCACGGGTTA CGAGGAGGCC 
GCTGCGCAGG GGTTGCTGGC GGGTTTGAAC GCTGCGCGCA AAGCGCGTGA CTTGGAACCC 
TGGTGGCCGG GCCGGGACGA GGCCTACCTC GGCGTGCTGG TCGACGACCT CATCACCCGC 
GGCACCTCCG AACCGTACCG TATGTTCACC AGCCGCGCCG AGTACCGCCT GGTGCTGCGC 
GAAGACAATG CCGACCTGCG CCTCACCGAA ACCGGCCGCG CCCTGGGACT GGTGGACGAT 
GCCCGCTGGT CGGCATTCGA AGCCAAGCGC GAAGCCATCG AGACGCTGGG CGCGCGTCTT 
GCCGCCCGGC GCATCCGCCC CGACAGCAGT CAAGCCGAAA GCTGGAACGC GCTCACCGAA 
ATACCGCTGC AACGCGAAGC CAGCCTGCTG GAACTGCTCA GACGCCCGGA TGTCGGGCTG 
GAACACATTG CCGGCCATGC TCCGGACTTG TTCGAAGGCA TGGACAGGGC GGTGCGTGAA 
CAGGTGGAAA TCGCAGCCAA GTACACCGGC TACATCGAAC GCCAGCAGGC CGAAATCGAA 
CGCGTCCGGC GCTACGAGGC CTGGCAATTG CCGGACTCCA TGGATTACGG CAAGGTCATC 
GGGCTCTCCA GCGAAGTGCG GGAAAAGCTC GGCCGGGTCA GGCCCGCCAC CGTCGGCCAG 
GCGGCGCGTA TCCCAGGCAT CACGCCGGCG GCGATCTCGC TGCTGCTGGT ACACCTGCGC 
CGAACCGGCG CTGCGTGA 

 

Protein sequence

MFFDDEFDVI VVGGGHAGTE AALAAARTGA RTLLLTQNVE TLGQMSCNPA IGGIGKGHLV 
KEIDAMGGLM ARAADRAGIQ FRILNASKGP AVRATRAQAD RSLYRKAVRE GLSAQENLSL 
FQQTVVDLIV EGRRAAGVVT QMGLKFRSRC VVLTVGTFLA GRIHIGLENY DGGRAGDPPA 
TDLARRLRDL GFKVARLKTG TPPRIDRRSV DFSRMAEQPG DDPTPVFSFL GTREEHPPQV 
SCYITRTNER THELIRAGLD RSPMFTGVIE GIGPRYCPSI EDKVVRFAER DSHQIFVEPE 
GLDSLEIYPN GISTSLPFDV QLAVVRSIQG FEDARITRPG YAIEYDFFDP RDLRHSLETR 
HMENLFFAGQ INGTTGYEEA AAQGLLAGLN AARKARDLEP WWPGRDEAYL GVLVDDLITR 
GTSEPYRMFT SRAEYRLVLR EDNADLRLTE TGRALGLVDD ARWSAFEAKR EAIETLGARL 
AARRIRPDSS QAESWNALTE IPLQREASLL ELLRRPDVGL EHIAGHAPDL FEGMDRAVRE 
QVEIAAKYTG YIERQQAEIE RVRRYEAWQL PDSMDYGKVI GLSSEVREKL GRVRPATVGQ 
AARIPGITPA AISLLLVHLR RTGAA