Gene SERP2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2523 
Symbol 
ID3242265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2579233 
End bp2579976 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content33% 
IMG OID637169195 
Productglycerophosphoryl diester phosphodiesterase UgpQ, putative 
Protein accessionYP_190064 
Protein GI57865870 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0212323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACTG TATATGGACA TAGAGGATTA CCTAGTAAAG CTCCGGAAAA TACAATTGCA 
TCATTTAAAG CTGCTTCAGA AGTAGAAGGT ATAAACTGGT TGGAGTTAGA TGTTGCAATT
ACAAAAGATG AACAACTGAT TATCATTCAT GATGATTATT TAGAACGGAC TACAAATATG
TCCGGGGAAA TAACTGAATT GAATTATGAT GAAATTAAAG ATGCTTCTGC AGGATCTTGG
TTTGGTGAAA AATTCAAAGA TGAACATTTG CCAACTTTCG ATGATGTAGT AAAAATAGCA
AATGAATATA ATATGAATTT AAATGTAGAA TTAAAAGGTA TTACTGGACC GAATGGACTA
GCACTTTCTA AAAGTATGGT TAAGCAAGTG GAAGAACAAT TAACAAACTT AAATCAGAAT
CAAGAAGTGC TCATTTCAAG CTTTAATGTT GTGCTTGTTA AACTTGCAGA AGAAATCATG
CCACAATATA ACAGAGCAGT TATATTCCAT ACAACTTCGT TTCGTGAAGA CTGGAGAACA
CTTTTAGATT ACTGTAATGC TAAAATAGTA AACACTGAAG ATGCCAAACT TACTAAAGCA
AAAGTAAAAA TGGTAAAAGA AGCGGGTTAT GAATTGAACG TATGGACTGT AAACAAACCA
GCACGTGCAA ACCAACTTGC TAATTGGGGA GTTGATGGTA TCTTTACAGA CAATGCAGAT
AAAATGGTGC ATTTGTCTCA ATAG
 
Protein sequence
MLTVYGHRGL PSKAPENTIA SFKAASEVEG INWLELDVAI TKDEQLIIIH DDYLERTTNM 
SGEITELNYD EIKDASAGSW FGEKFKDEHL PTFDDVVKIA NEYNMNLNVE LKGITGPNGL
ALSKSMVKQV EEQLTNLNQN QEVLISSFNV VLVKLAEEIM PQYNRAVIFH TTSFREDWRT
LLDYCNAKIV NTEDAKLTKA KVKMVKEAGY ELNVWTVNKP ARANQLANWG VDGIFTDNAD
KMVHLSQ