Gene SERP2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2517 
SymbolxylR 
ID3242345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp2572811 
End bp2573920 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content29% 
IMG OID637169189 
Productxylose repressor 
Protein accessionYP_190058 
Protein GI57865856 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0778227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAAGGG AAATTTATAA CCATCATAAT ATTTCGCGTA CTCAAATATC TAAAAATCTT 
GAGATTAATA AGGCAACGAT TTCTAGTATT TTGAATAAGT TAAAGTATAA ATCTCTTGTT 
AATGAGGTTG GTGAGGGTGA TAGCACGAAG AGTGGTGGTA GAAAACCTAT TCTTCTGAAG 
GTTAATCATC TTTATGGTTA TTTTATTTCT TTGGATTTAA CTTATAGTTC TGTTGAAGTG 
ATGTACAATT ATTTTGATGG TAATGTCATT AAGCATGAAT CTTATGATTT ACCTGATGAA 
AAGGTTAGTA GTATATTAAG CATAATAAAA AAACATATTG ATATTCAGGA GAAACTTGAT 
ACTTATAACG GACTATTAGG TGTGTCTGTT TCTATACATG GAGTTGTGGA TAATGAGCAG 
CATGTGACAT ATTTACCATT CCATGAAACT GAAGGAATTT CAATTGCTAA GAAAATAAAA 
GAAATTACTA ATGTTCCAGT CGTAGTTGAA AATGAAGCGA ATCTTTCAGC GTTATATGAA 
CGTAATTTTA ATCATAATTT ATCCTACAAT AATCTTATTG CTTTAAGTAT ACATAAAGGT 
ATTGGTGCTG GGCTTATTAT TAATAATCAA TTGTATCGTG GTGCAAATGG GGAAGCGGGT 
GAAATTGGAA AAACACTTGT CTCAAAAGTT AGCGATAATG TGGAGATCTT TCATAAGATT 
GAAGATATTT TTTCACAAGA AGCTTTACTG CATAATTTAA GTAATCAACT AAATGAGAAG 
ATGACGCTTA GCAAATTAAT TCAATTTTAT AATGAAAAAA ATCCAGTCGT AGTTGAAGAA 
ATGGAACAAT TTATAAATAA AATTGCTGTT TTAATACATA ATTTAAACAC CCAGTTTAAT 
CCGAATGCAA TTTACATTAA CTGTCCATTG TTCAATGAAA TGCCTGAAAT ATTAGAAGCA 
ATTAAGAACC AGTTCAAACA ATATTCACGT AACGAAATTC AAATAAAGTT AACATCTAAT 
GTCAAATTTG CAACTTTGCT AGGTGGTACA TTAGCAATTA TCCAAAAAGT ACTACAGATT 
AATGATATTT ACTTAGATAT AAAAGCATAA
 
Protein sequence
MLREIYNHHN ISRTQISKNL EINKATISSI LNKLKYKSLV NEVGEGDSTK SGGRKPILLK 
VNHLYGYFIS LDLTYSSVEV MYNYFDGNVI KHESYDLPDE KVSSILSIIK KHIDIQEKLD 
TYNGLLGVSV SIHGVVDNEQ HVTYLPFHET EGISIAKKIK EITNVPVVVE NEANLSALYE 
RNFNHNLSYN NLIALSIHKG IGAGLIINNQ LYRGANGEAG EIGKTLVSKV SDNVEIFHKI 
EDIFSQEALL HNLSNQLNEK MTLSKLIQFY NEKNPVVVEE MEQFINKIAV LIHNLNTQFN 
PNAIYINCPL FNEMPEILEA IKNQFKQYSR NEIQIKLTSN VKFATLLGGT LAIIQKVLQI 
NDIYLDIKA