Gene SERP2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2489 
SymbolkdpD 
ID3242595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2546845 
End bp2549514 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content37% 
IMG OID637169163 
Productsensor histidine kinase KdpD 
Protein accessionYP_190032 
Protein GI57865938 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.891393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA CATATAAAAA AAGAGGGAAA CTTACCATTT ATTTAGGCTA TAGCCCAGGG 
GTAGGTAAAA CGTATGAAAT GTTATCAAAT GGTATTGATC AGTATCAAGA AGGTGCAGAT
ATTAAAATTG GTTATATCGA ACCCCATCAA CGCCCTGAAA CCAATGCACT GGTTCAACAA
TTGCCTGAAA TTTCGACCTC CAGCCGTAAA TTTGGCAGCC ACACCTTTCA CTATATAGAT
GTCTCTAAAA TCATAGAAGC TAATCCAGAT GTGGTCTTAA TTGATGAACT AGCACATACA
AACATTTCAA AAGAGCGCCA TTTAAAACGT TATAAGGATA TAGAAGAAAT TCTATCGCAT
GGTATCGATG TCTGGACAAC ACTCAACATC CAACATATCG AGAGTCTAAG CGGACAAATT
GCGTTAATGA CAGGTATTCA AGTTACAGAA CGTGTGCCCG ACCAATTCAT TACGTCAGCA
GATGCCTTTG AAGTTGTGGA TATTTCACCA AATATGTTGA TTCAGCGCCT TAAAGCAGGA
AAAGTATATA AAAAAGAACG CTTAGAAACA GCCTTTTCTA ATTTCTTTAC GTATGAAAAT
CTGACAGAGC TGCGTGAACT TACACTCAGA ACTGTCGCAG ATATTATGAG TCAAAAAGGA
CAACAATATA AAACTAAACA TACCGACATT ACACCGCATA TTGCGGTAGC TATCAGCGGC
AGTATTTATA ACGAACGGGT CATACGAGAA GCAAGACGTG CTGCCTATAA AGAACATGCT
AAATTCACAG CTGTGTATAT TGATGTCTTT GAGACACCGT CAGAAAGCAG AAAACAAGAT
CATTATGTCC ATAAAAATCT AATGCTCGCC AAAGCGTTAG GTGCAGAAAT CAAAGTGTTG
TATGCACAAG ATATTGCGAA AGCGTTAACC GATTGGTGTG ATCTCGCTTT TGTGACGAAG
CTAGTCCTTG GACAGTCAGA ACAGCCACGT TGGAAAGATT ACTTTAAACA GTCACTCATT
GAACAAATTA ATCACGTACC ACACCATTTC AAGTTAGAAA TTGTACCGAT TCATTATATT
CATTCAGACA AACCTACAAA TACACCTAAG CAAGCTCAAA AATCCTCTCG TTTAACTGTA
GAGATTATGA AGATGCTTGT AATTCAAACG ATCTGTGTCT TGCTCGGTAT ATGGGTTTAC
AACTTAGATA AAAGCGAATC CAGTGCCATT ATCTTGCTGA TGTTCTTTAT CGGTATTATC
GTGCTTTCTA TTTGGACCCA ATCCTATTTA ATCGGATTCT TTGCGTCTAT CTTAAATGTG
TTTGTTTTTA ATTATTTCTT TACGGTGCCA AGATTCACTT TAGAAATGTA TCGCTTTGAA
TATCCGATTA CGTTTGCGAC CAGTATTTTT GCTAGTATCT TTACGAGTGC CATCTTAAAG
AATTTAAAAC ATCAGCATTC CTTAACAGAA CGGCAGTTAT ATCGGACCAA TATTATGCTG
CAATTTAACC AGTCCATTAA AGAATCTTAT TCAATTGAAC GCTTATTAAA TATTGCTGGT
GATCAGATTC ATCAGCTACT CAATCAGGAT GTCACGGTAT TCTTAATTCA AAGTAAGAAA
GTCGCTGCTT CCAACTCATT TGGAAACAGA AGCATTTCAA GCTCAGATAA GACACATGAT
GCTGAGACAT TGAGCTGGGT CATTGAAAAT GAAAGCCGTG CCGGTAAATT AACCGATACC
TTTCCTGGCA GTAAATTTTT GTGTATTCCC ATTGGCACAA ATCCAGTCAA AGGTGTGATT
TCTATCCGCT TCACCGACGA AACTTACATC GACACCTATG ACAATTCAAT ATTAGACTCT
ATGTTGAACG ATATTACCCT GGCAATAGAG AATGTGGATC TATTAAAACA AACCAGACAA
TCCATATTGA AAGCTGAACG AGAAGCCACA CGTTCAAACT TCTTGCATTC AATTTCACAT
GATATTAGAA CACCACTGAC TTCCATTATG GGCAACTTAG ATATGCTGAA ATACCATAAC
GAGCATTTAA ACGATCAACA ACAAGCAGAA CTCTTAACTG CTTCTTATGG CGAAGCACAA
TATCTGCATA CCTTAGTCAC AAATATTTTA TCTTTGACTA AGTTAGAAAG CTCTGACATT
CAAATACAAC GCACCCCTTA TTTAGTAGAA GAACTTCTAG AAGAATTTGA AGAAGGCCTC
ATACGCAGAC ACCAAGCAAA TCATGTCATT ATTGAAAATG AGGATGACGC TTCACTCATT
AATATCGACA GTAAATTAAT ACTGCAAGTG CTATTCAACC TTATCGATAA TGCTTTAAAG
CATGCAGAAT CACATTCTGA AATAAAACTG CACGTTCAAC ATGAAACAAA CAAAATAAAA
TTCGAAATGA TAGATTGCGG AAAAGGTATT CCAGAAGAAG AACGTCAATT GATTTTTAAT
CCCTATTATT CAGGAGACAA CTTTAAAGAC AATAAAAAAG ATAGTTTGGG ATTAGGGCTC
TATTTAGTAC AACTCATCTT GAAACAACAC AACAGTGAAT TAGAATATCA ACCGAATACA
CCACAAGGCA GTATTTTTTA TTTTTATTTG ACTGTTAATC CAATTGAAAT GGAGGGAGCC
ATGGATGAAA ACAACATTAT TGGTCGTTGA
 
Protein sequence
MESTYKKRGK LTIYLGYSPG VGKTYEMLSN GIDQYQEGAD IKIGYIEPHQ RPETNALVQQ 
LPEISTSSRK FGSHTFHYID VSKIIEANPD VVLIDELAHT NISKERHLKR YKDIEEILSH
GIDVWTTLNI QHIESLSGQI ALMTGIQVTE RVPDQFITSA DAFEVVDISP NMLIQRLKAG
KVYKKERLET AFSNFFTYEN LTELRELTLR TVADIMSQKG QQYKTKHTDI TPHIAVAISG
SIYNERVIRE ARRAAYKEHA KFTAVYIDVF ETPSESRKQD HYVHKNLMLA KALGAEIKVL
YAQDIAKALT DWCDLAFVTK LVLGQSEQPR WKDYFKQSLI EQINHVPHHF KLEIVPIHYI
HSDKPTNTPK QAQKSSRLTV EIMKMLVIQT ICVLLGIWVY NLDKSESSAI ILLMFFIGII
VLSIWTQSYL IGFFASILNV FVFNYFFTVP RFTLEMYRFE YPITFATSIF ASIFTSAILK
NLKHQHSLTE RQLYRTNIML QFNQSIKESY SIERLLNIAG DQIHQLLNQD VTVFLIQSKK
VAASNSFGNR SISSSDKTHD AETLSWVIEN ESRAGKLTDT FPGSKFLCIP IGTNPVKGVI
SIRFTDETYI DTYDNSILDS MLNDITLAIE NVDLLKQTRQ SILKAEREAT RSNFLHSISH
DIRTPLTSIM GNLDMLKYHN EHLNDQQQAE LLTASYGEAQ YLHTLVTNIL SLTKLESSDI
QIQRTPYLVE ELLEEFEEGL IRRHQANHVI IENEDDASLI NIDSKLILQV LFNLIDNALK
HAESHSEIKL HVQHETNKIK FEMIDCGKGI PEEERQLIFN PYYSGDNFKD NKKDSLGLGL
YLVQLILKQH NSELEYQPNT PQGSIFYFYL TVNPIEMEGA MDENNIIGR