| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2372 |
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| Symbol | |
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| ID | 3242239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2419711 |
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| End bp | 2421309 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637169051 |
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| Product | peptide ABC transporter, peptide-binding protein |
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| Protein accession | YP_189920 |
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| Protein GI | 57865746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC TCACAAAACT AAGTACAGTC ATTTTTGTAT CTGGGATTAT TTTAGCCGGT
TGTGGAAGTA ACAAAGAACT AACAGAGAAA AAAGAGAATA AAGTATTATC ATATACAACT
GTCAAAGATA TTGGAGATAT GAATCCCCAT GTTTATGGAG GTTCAATGTC CGCAGAGAGT
ATGATTTATG AGCCGTTAGT TCGCAATACC AAGGATGGTA TTAAGCCATT ATTAGCGAAA
AAATGGGACA TTTCACCTGA TGGTAAAACA TATACGTTTT ATTTAAGGGA CGATGTATCT
TTTCATGATG GTACGAAATT TGATGCAGAC GCAGTGAAGA AAAACATCGA TGCAGTACAA
CAAAATAAGA AACTACATTC ATGGTTAAAA CTTTCAACAC TGATTGATGA TGTCAAAGTT
AAGGATAAGT ATACGGTACA ACTACATTTG AAGGAAGCTT ATCAACCTGC GTTAGCAGAA
CTAGCTATGC CACGACCATA CGTTTTTGTA TCGCCTAAAG ATTTTAAACA CGGTACAACC
AAAGATGGTG TGAAATCATT TGACGGTACA GGACCATTTA AAATGGGTGA ACACAAAAAA
GATATATCTG CAGAATTTAA TAAAAATAAT CAATATTGGG GAGAAAAGGC AAAGTTAAAT
AAAGTAGAAG CAAAAGTTAA ACCTGCTGGA GAAACAGCAT TTTTATCAAT GAAAAAAGGA
GAAACCAACT TTGCTTATAC AGATGATAGA GGTACAGACA GCTTAGATAA AGATAGTTTA
AAACAATTAA AAGAAACCGG AAGCTATCAA GTAAAACGTA GCCAAGCCAT GAATACAAAA
ATGCTTGTTG TTAATTCTGG TAAGAAAGAT AGTGCAGTCA GTGATAAAGC AGTCAGACAA
GCATTAGGTC ACATGGTAAA TAGAGATAAA ATAGCTCAAG ATATTTTAAA CAAGCAAGAA
AAGCCAGCCA CACAACTATT TGCTAAAAAT GTGACAGATA TAAACTTTAA TTTACCAACA
AGAACATATG ATAAGAAAAA AGCACAAGCG TTATTAGATA AGGCCGGATG GGTGCTTTCA
AAAGATCGAC AAGTTCGTCA AAAAGAGGGC AAAGATTTGA ATCTTAAGTT GTATTATGAC
AAAGGCTCTT CCAGTCAAAA AGAACAAGCT GAATTCTTAG AGGCAGAATT TAAGAAGTTA
GGTGTACAAC TAGATATAAA CGGAGAAACG TCAGATAAAG TAGCTGAACG TCGTAGTTCT
GGTGATTACG ATCTAATGTT TAATCAAACA TGGGGGCTAT TATATGATCC TCAGAGTACA
TTAGCAGCAT TTAAGACGAA AACGGGATAT GAAAGTGCAA CATTAGGTAT TAAGAATAAG
TCACAACTGT ACAAAGATAT TGATGAGGCG TTCAAAATTC AAGATGCAAA GGAACGTTCA
AAAGCGTATC AGCAAATTTT GAAACAAGTT GACGATGAAG GTGTCTTTAT TCCAATTACT
CACGGGAGAA TGACTGTTGT TGCACCTAAA GATTTACAAA AATTATCCTT TACACAATCA
CAATATGAGC TTCCATTTAA TGAAATGCAA TATAAATAA
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| Protein sequence | MNKLTKLSTV IFVSGIILAG CGSNKELTEK KENKVLSYTT VKDIGDMNPH VYGGSMSAES
MIYEPLVRNT KDGIKPLLAK KWDISPDGKT YTFYLRDDVS FHDGTKFDAD AVKKNIDAVQ
QNKKLHSWLK LSTLIDDVKV KDKYTVQLHL KEAYQPALAE LAMPRPYVFV SPKDFKHGTT
KDGVKSFDGT GPFKMGEHKK DISAEFNKNN QYWGEKAKLN KVEAKVKPAG ETAFLSMKKG
ETNFAYTDDR GTDSLDKDSL KQLKETGSYQ VKRSQAMNTK MLVVNSGKKD SAVSDKAVRQ
ALGHMVNRDK IAQDILNKQE KPATQLFAKN VTDINFNLPT RTYDKKKAQA LLDKAGWVLS
KDRQVRQKEG KDLNLKLYYD KGSSSQKEQA EFLEAEFKKL GVQLDINGET SDKVAERRSS
GDYDLMFNQT WGLLYDPQST LAAFKTKTGY ESATLGIKNK SQLYKDIDEA FKIQDAKERS
KAYQQILKQV DDEGVFIPIT HGRMTVVAPK DLQKLSFTQS QYELPFNEMQ YK
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