Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2372 |
Symbol | |
ID | 3242239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2419711 |
End bp | 2421309 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637169051 |
Product | peptide ABC transporter, peptide-binding protein |
Protein accession | YP_189920 |
Protein GI | 57865746 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC TCACAAAACT AAGTACAGTC ATTTTTGTAT CTGGGATTAT TTTAGCCGGT TGTGGAAGTA ACAAAGAACT AACAGAGAAA AAAGAGAATA AAGTATTATC ATATACAACT GTCAAAGATA TTGGAGATAT GAATCCCCAT GTTTATGGAG GTTCAATGTC CGCAGAGAGT ATGATTTATG AGCCGTTAGT TCGCAATACC AAGGATGGTA TTAAGCCATT ATTAGCGAAA AAATGGGACA TTTCACCTGA TGGTAAAACA TATACGTTTT ATTTAAGGGA CGATGTATCT TTTCATGATG GTACGAAATT TGATGCAGAC GCAGTGAAGA AAAACATCGA TGCAGTACAA CAAAATAAGA AACTACATTC ATGGTTAAAA CTTTCAACAC TGATTGATGA TGTCAAAGTT AAGGATAAGT ATACGGTACA ACTACATTTG AAGGAAGCTT ATCAACCTGC GTTAGCAGAA CTAGCTATGC CACGACCATA CGTTTTTGTA TCGCCTAAAG ATTTTAAACA CGGTACAACC AAAGATGGTG TGAAATCATT TGACGGTACA GGACCATTTA AAATGGGTGA ACACAAAAAA GATATATCTG CAGAATTTAA TAAAAATAAT CAATATTGGG GAGAAAAGGC AAAGTTAAAT AAAGTAGAAG CAAAAGTTAA ACCTGCTGGA GAAACAGCAT TTTTATCAAT GAAAAAAGGA GAAACCAACT TTGCTTATAC AGATGATAGA GGTACAGACA GCTTAGATAA AGATAGTTTA AAACAATTAA AAGAAACCGG AAGCTATCAA GTAAAACGTA GCCAAGCCAT GAATACAAAA ATGCTTGTTG TTAATTCTGG TAAGAAAGAT AGTGCAGTCA GTGATAAAGC AGTCAGACAA GCATTAGGTC ACATGGTAAA TAGAGATAAA ATAGCTCAAG ATATTTTAAA CAAGCAAGAA AAGCCAGCCA CACAACTATT TGCTAAAAAT GTGACAGATA TAAACTTTAA TTTACCAACA AGAACATATG ATAAGAAAAA AGCACAAGCG TTATTAGATA AGGCCGGATG GGTGCTTTCA AAAGATCGAC AAGTTCGTCA AAAAGAGGGC AAAGATTTGA ATCTTAAGTT GTATTATGAC AAAGGCTCTT CCAGTCAAAA AGAACAAGCT GAATTCTTAG AGGCAGAATT TAAGAAGTTA GGTGTACAAC TAGATATAAA CGGAGAAACG TCAGATAAAG TAGCTGAACG TCGTAGTTCT GGTGATTACG ATCTAATGTT TAATCAAACA TGGGGGCTAT TATATGATCC TCAGAGTACA TTAGCAGCAT TTAAGACGAA AACGGGATAT GAAAGTGCAA CATTAGGTAT TAAGAATAAG TCACAACTGT ACAAAGATAT TGATGAGGCG TTCAAAATTC AAGATGCAAA GGAACGTTCA AAAGCGTATC AGCAAATTTT GAAACAAGTT GACGATGAAG GTGTCTTTAT TCCAATTACT CACGGGAGAA TGACTGTTGT TGCACCTAAA GATTTACAAA AATTATCCTT TACACAATCA CAATATGAGC TTCCATTTAA TGAAATGCAA TATAAATAA
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Protein sequence | MNKLTKLSTV IFVSGIILAG CGSNKELTEK KENKVLSYTT VKDIGDMNPH VYGGSMSAES MIYEPLVRNT KDGIKPLLAK KWDISPDGKT YTFYLRDDVS FHDGTKFDAD AVKKNIDAVQ QNKKLHSWLK LSTLIDDVKV KDKYTVQLHL KEAYQPALAE LAMPRPYVFV SPKDFKHGTT KDGVKSFDGT GPFKMGEHKK DISAEFNKNN QYWGEKAKLN KVEAKVKPAG ETAFLSMKKG ETNFAYTDDR GTDSLDKDSL KQLKETGSYQ VKRSQAMNTK MLVVNSGKKD SAVSDKAVRQ ALGHMVNRDK IAQDILNKQE KPATQLFAKN VTDINFNLPT RTYDKKKAQA LLDKAGWVLS KDRQVRQKEG KDLNLKLYYD KGSSSQKEQA EFLEAEFKKL GVQLDINGET SDKVAERRSS GDYDLMFNQT WGLLYDPQST LAAFKTKTGY ESATLGIKNK SQLYKDIDEA FKIQDAKERS KAYQQILKQV DDEGVFIPIT HGRMTVVAPK DLQKLSFTQS QYELPFNEMQ YK
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