Gene SERP2263 details

Gene Information

• Locus tag: SERP2263
• ID: 3242095
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 2295783
• End bp: 2297750
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637168944
• Product: N-acetylmuramoyl-L-alanine amidase
• Protein accession: YP_189814
• Protein GI: 57865678
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1705] Muramidase (flagellum-specific)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA ATAAATTTTT AGTATATTTA CTATCGACGG CGCTTATCAC GCCAACCTTC 
GCTACACAAA CAGCTTTTGC TGAAGATTCA TCTAATAAAA ATACAAATTC AGATAAAATG 
GAACAACATC AATCACAAAA AGAAACATCA AAACAATCTG AAAAAGATGA ATTTAACAAC 
GATGATTCTA AACACGATTC TGATGATAAA AAAAGCACTT CTGACAGCAA GGACAAAGAC 
TCTAATAAAC CATTATCAGC TGATTCAACA CATCGTAACT ATAAAATGAA AGATGATAAT 
TTAGTTGATC AACTTTATGA TAATTTTAAG TCTCAGTCAG TAGATTTTTC TAAATACTGG 
GAACCGAATA AATACGAAGA CAGTTTTAGT TTAACGTCAC TCATCCAAAA TTTATTTGAT 
TTTGATTCTG ATATAACAGA TTACGAACAG CCACAAAAGA CAAGCCATTC TTCTAATGAC 
GAAAAAGATC AAGTAGACCA AGCAGATCAG GCAAAACAAC CATCACAACA TCAAGAACCA 
TCACAGTCGT CTGCTAAACA AGATCAAGAA CCATCAAACG ATGAAAAAGA AAAGACAACT 
AACCACCAAG CCGATTCTGA CGTCAGTGAT TTACTTGGAG AAATGGATAA AGAAGATCAA 
GAAGGCGAAA ACGTAGATAC AAACAAAAAT CAATCTTCTT CTGAGCAACA ACAAACTCAA 
GCGAATGATG ATAGCTCAGA ACGTAACAAA AAATATTCTA GTATTACAGA TTCAGCATTA 
GACTCTATAT TAGATGAATA TAGTCAGGAC GCTAAGAAAA CAGAAAAAGA TTACAATAAG 
AGCAAGAATA CAAGTCACAC TAAAACATCT CAAAGTGATA ATGCCGACAA AAATCCACAA 
TTACCAACAG ATGATGAATT AAAACATCAA TCAAAACCTG CACAATCATT TGAGGATGAC 
ATTAAACGCT CAAATACACG TTCAACAAGT CTTTTCCAAC AACTACCTGA ATTAGACAAT 
GGTGACTTAT CTTCTGATTC ATTTAATGTT GTTGACAGTC AAGACACACG TGATTTCATT 
CAATCAATTG CTAAAGATGC GCATCAGATT GGAAAAGACC AAGATATATA TGCATCAGTT 
ATGATTGCTC AAGCTATTTT AGAATCTGAC TCTGGAAAAA GTTCACTTGC ACAATCACCA 
AATCATAACT TGTTTGGAAT CAAAGGTGAC TACAAAGGAC AATCTGTAAC TTTTAATACT 
TTAGAAGCTG ATAGCAGTAA TCATATGTTT AGTATCCAAG CAGGTTTCCG TAAATACCCA 
AGTACTAAAC AATCTCTTGA AGATTATGCA GATTTAATCA AACATGGTAT CGATGGTAAT 
CCGTCAATTT ATAAACCAAC TTGGAAGAGT GAAGCTCTAT CATATAAAGA TGCTACTTCA 
CATCTGTCAC GCTCATACGC CACAGATCCT AATTATTCTA AAAAATTAAA TAGTATTATT 
AAACATTATC ATTTAACATC TTTTGACAAA GAAAAAATGC CTAACATGAA GAAATATAAT 
AAATCAATAG GTACGGATGT GTCTGGTAAT GACTTCAAAC CATTTACTGA AACTTCCGGT 
ACATCACCTT ACCCACATGG CCAATGTACT TGGTATGTGT ACCACCGTAT GAATCAATTT 
GATGCATCCA TTTCTGGTGA CTTAGGTGAT GCTCATAATT GGAATAACCG TGCTGAAAGT 
GAAGGCTATA CGGTAACGCA CACACCTAAA AATCATACTG CAGTTGTGTT TGAAGCTGGG 
CAATTAGGTG CTGATACACA GTATGGTCAT GTTGCCTTCG TTGAAAAAGT TAATGACGAC 
GGTTCAATTG TTATTTCTGA ATCAAATGTT AAAGGATTAG GTGTCATTTC ATTCAGAACT 
ATTGATGCAG GAGATGCTCA AGATTTAGAT TACATTAAAG GTAAATAG 

 

Protein sequence

MKKNKFLVYL LSTALITPTF ATQTAFAEDS SNKNTNSDKM EQHQSQKETS KQSEKDEFNN 
DDSKHDSDDK KSTSDSKDKD SNKPLSADST HRNYKMKDDN LVDQLYDNFK SQSVDFSKYW 
EPNKYEDSFS LTSLIQNLFD FDSDITDYEQ PQKTSHSSND EKDQVDQADQ AKQPSQHQEP 
SQSSAKQDQE PSNDEKEKTT NHQADSDVSD LLGEMDKEDQ EGENVDTNKN QSSSEQQQTQ 
ANDDSSERNK KYSSITDSAL DSILDEYSQD AKKTEKDYNK SKNTSHTKTS QSDNADKNPQ 
LPTDDELKHQ SKPAQSFEDD IKRSNTRSTS LFQQLPELDN GDLSSDSFNV VDSQDTRDFI 
QSIAKDAHQI GKDQDIYASV MIAQAILESD SGKSSLAQSP NHNLFGIKGD YKGQSVTFNT 
LEADSSNHMF SIQAGFRKYP STKQSLEDYA DLIKHGIDGN PSIYKPTWKS EALSYKDATS 
HLSRSYATDP NYSKKLNSII KHYHLTSFDK EKMPNMKKYN KSIGTDVSGN DFKPFTETSG 
TSPYPHGQCT WYVYHRMNQF DASISGDLGD AHNWNNRAES EGYTVTHTPK NHTAVVFEAG 
QLGADTQYGH VAFVEKVNDD GSIVISESNV KGLGVISFRT IDAGDAQDLD YIKGK