| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2242 |
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| Symbol | ipdC |
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| ID | 3242689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 2269462 |
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| End bp | 2271111 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637168923 |
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| Product | indole-3-pyruvate decarboxylase |
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| Protein accession | YP_189793 |
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| Protein GI | 57865655 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAAC GCGTAGGACA ATATTTAATG GACGCGGTTT ATTCAGCAGG TGCTGACAAA
GTTTTTGGTG TCCCAGGAGA TTTTAATCTA GCCTTTTTAG ACGATATTAT TGCACATAAT
GATATTAAAT GGATTGGTAA TACAAATGAG CTTAATGCAA GTTATGCTGC CGACGGATAT
GCACGTATTA ATGGCATCGG TGCAATGGTA ACAACATTTG GAGTGGGTGA ATTAAGTGCT
GTCAACGGAA TCGCTGGATC TTATGCTGAG CGTGTGCCAG TTATTGCCAT CACTGGGGCA
CCTACTCGAG CTGTAGAACA AGAAGGCAAA TACGTTCACC ATTCCCTTGG CGAAGGAACT
TTTGATGATT ATAGAAAAAT GTTTGAGCCT ATTACAACAG CGCAAGCTTA TATTACACCT
GATAATGCTA CCACAGAAAT TCCAAGAGTA ATCAATACGG CGCTTCAACA ACGTCGTCCA
GTTCACATTC ATTTACCTAT TGATGTCGCA CTAACAGAGA TTGAAATTTC AAACCCATTC
AAACCAGAAG TCGAACCACA AAAAAACGTT CAAAGTTATA TCAATATGGT TCAAGACAAA
CTTGAATCGG CATCACAACC TGTCATTATT ACAGGACATG AAATAAATAG TTTCCATCTG
CATAAAGAAC TCGAACAATT CGTTAATCAA ACTCAAATTC CAGTTGTTCA GTTATCTTTA
GGTAAAGGTG CATTTAATGA AGAAAATCCT TATTATATGG GTATCTTTGA TGGTTCAATA
GCAGAACAAG ATATTCAAGA TTATGTTAAT CAAAGTGATG CTATTTTGAA TATTGGTGCT
AAATTAACAG ATTCTGCAAC AGCTGGGTTC TCATATCAAT TTGATATTAA TGAAGTGATT
ATGCTAAATC ATAATGAATT TAAAATTAAT GATACATGCA TCGAAGCATT TTCATTACCA
AATATATTAA ATGGTTTAAA TAAGTATATT CACTACAAAA ACACTAATGA TTTCCCACAA
TATGAGAGAC CACAATCACA CAATTACGAA CTTAGTGATC AGCCATTAAC TCAAGAGACT
TATTTCAATA TGATGCAAGA TTTTTTACAA CAAGATGATA TTTTAATCGC TGAACAAGGT
ACATCATTCT TTGGTGCTTA TGACTTAGCC TTGTACAAAG ATAATACTTT TATCGGGCAA
CCATTATGGG GATCTATCGG CTATACACTA CCAGCAACGC TAGGAACACA AATTGCAAAT
CCATATCGTC GAAACATTCT ATTAATTGGT GATGGATCAC TACAATTAAC TGTTCAATCA
TTATCTACAA TGATTCGTCA AAATTTAAAC CCTGTGATAT TTGTAATTAA TAACGATGGT
TATACAGTTG AGAGAATGAT TCATGGTATG AAAGAACCTT ACAATGACAT TCGCATGTGG
GATTACAAAT CATTACCTTC TGTATTTGGT GGTGACAATG TTTTAGTTCA TGATGTAAAC
ACTTCAGAAG AACTCATGCT CACCTTCGAA AATATTAAAT CTAATAGTGA TCGCATGCAC
TTTGTAGAAG TGAAAATGGC TGTTGAAGAT GCACCAGTTA AATTAAGTAA TATAGCTAAA
GCATTCGCAT CACAAAACAA ATCATCTTAA
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| Protein sequence | MKQRVGQYLM DAVYSAGADK VFGVPGDFNL AFLDDIIAHN DIKWIGNTNE LNASYAADGY
ARINGIGAMV TTFGVGELSA VNGIAGSYAE RVPVIAITGA PTRAVEQEGK YVHHSLGEGT
FDDYRKMFEP ITTAQAYITP DNATTEIPRV INTALQQRRP VHIHLPIDVA LTEIEISNPF
KPEVEPQKNV QSYINMVQDK LESASQPVII TGHEINSFHL HKELEQFVNQ TQIPVVQLSL
GKGAFNEENP YYMGIFDGSI AEQDIQDYVN QSDAILNIGA KLTDSATAGF SYQFDINEVI
MLNHNEFKIN DTCIEAFSLP NILNGLNKYI HYKNTNDFPQ YERPQSHNYE LSDQPLTQET
YFNMMQDFLQ QDDILIAEQG TSFFGAYDLA LYKDNTFIGQ PLWGSIGYTL PATLGTQIAN
PYRRNILLIG DGSLQLTVQS LSTMIRQNLN PVIFVINNDG YTVERMIHGM KEPYNDIRMW
DYKSLPSVFG GDNVLVHDVN TSEELMLTFE NIKSNSDRMH FVEVKMAVED APVKLSNIAK
AFASQNKSS
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