Gene SERP2183 details

Gene Information

• Locus tag: SERP2183
• Symbol: nrdD
• ID: 3240763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 2215661
• End bp: 2217511
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637168869
• Product: anaerobic ribonucleoside triphosphate reductase
• Protein accession: YP_189739
• Protein GI: 57865540
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase
• TIGRFAM ID: [TIGR02487] anaerobic ribonucleoside-triphosphate reductase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTACTC TAGAAACATC ATTAACTCGA TTAATCACAA AAGATCCAAC TATATTAAAT 
GAAAATGCAA ATAAAGATAG TAATACATTC TCAACAATGC GAGATTTAAC AGCTGGAACG 
GTATCAAAGT CTTATGCACT CGATCATTTA CTTCCAAAGC ATGTTGCTCA TGCACATCAA 
TCGGGAGATA TTCATTTTCA CGACTTAGAT TACCATCCAT TTCAACCATT AACCAATTGT 
TGTCTCATAG ATGCAAAAGA TATGTTAGAG AATGGCTTTG AGATAGGCAA TGCTAATGTT 
ACAACACCTC AATCAATACA AACCGCTTCA GCACAACTTG TACAAATCAT TGCAAACGTT 
TCAAGCAGTC AATATGGAGG TTGTACTGTC GATCGTGTTG ACGAATTACT AAGTAAATAT 
GCACAAATGA ATGCACAACA TCACAGGGAA GTAGCGAATG ATTTCGTTCA ACCTGACAAA 
ATTGAGAATT ATGTGGATAC ACAAGTAACT AAGGATATTG GTGATGCAAT TGAAAGTTTA 
GAGTATGAGA TTAACACACT CTATACTTCC AATGGACAAA CGCCATTCGT TACTTTGGGA 
TTTGGTTTAG GAACAGATCA ATTAAGTCGA AAAATTCAAC AAGCAATTTT ACATACCCGT 
ATTAAAGGTC TCGGTAAAGA TAGGGTTACT GCAATTTTCC CTAAACTTGT ATTTTCGATA 
AAAAAGGGGG TTAACTTTAG TCCAGAAGAT CCTAACTATG ATATTAAACA ACTTGCATTG 
GAATGTTCAA CAAAGCGCAT GTATCCCGAT ATTTTAAATT ACGATAAACT TGTTGAACTG 
CTTGGTGATT TTAAAGCACC GATGGGATGT CGTTCATTTT TACCAAGTTG GAAGAATGAT 
GAAGGTCAAT TGGAAAATAA TGGACGATGT AACTTAGGTG TAGTGACGTT GAACGTACCG 
AGAATTGCAA TCGAAGCAGA TGGTGACATG CAGCAGTTTT GGGATATCTT TGAAAAACGC 
ATGCAATTAT TACATGATGC ACTTGTGTAT CGAATTCAAA GACTACAAGA TGCTATTCCA 
GATAACGCGC CTATTTTATA TAAAAGTGGT GCATTTAAAA ATAAACTCAC TTCAGAAGAT 
ACTGTCGATT CATTATTTAC AAAACAACGC GCAACGATTT CAATGGGGTA TATCGGTTTA 
TACGAAGCGG CAACATTATT TTATGGACCG AATTGGGAAC ACAATCCTGA AGCTAAAACA 
TTCACACTAG ACATATTAAG AGAAATGAAA CGTTATCAAG TAGAGTGGAC GAAACAATAT 
GATATTTGGT TCAGTATATA CAGTACACCT AGTGAATCAC TAACAGATAG ATTTTGCCGA 
TTGGACAAAG AAAAATTTGG ATTTATTCCA GATGTTACTG ATAAAGGATA TTACCAAAAT 
TCATTCCACT ATGATGTGCG TAAAGATGTA ACGCCGTTTG AAAAATTAGA TTTTGAAAAA 
GACTATCCTT ACTATGCAAG TGGTGGATTC ATTCATTATT GTGAATATCC AAAGTTAAAT 
CATAATCTGA AAGCTTTAGA AGCAGTATGG GATTATGCTT ATGATAAGGT AGGTTATTTA 
GGTACGAATA TTCCTATTGA TCACTGTTAT CGTTGTGGCT ATGATGGAGA TTTTGAAACT 
ACTGCTAACG GATATAGATG CCCACATTGT GGTAACACTG ATCCTAAAAC GGTTGACGTT 
GTAAAAAGAA CATGTGGTTA TTTAGGAAAT CCAGTTCAAA GACCTGTTAT TGAAGGTCGA 
CAAAAAGAGA TATGTGCAAG AGTGAAACAC ATGAAGGAAC CTCGTTCATG A 

 

Protein sequence

MTTLETSLTR LITKDPTILN ENANKDSNTF STMRDLTAGT VSKSYALDHL LPKHVAHAHQ 
SGDIHFHDLD YHPFQPLTNC CLIDAKDMLE NGFEIGNANV TTPQSIQTAS AQLVQIIANV 
SSSQYGGCTV DRVDELLSKY AQMNAQHHRE VANDFVQPDK IENYVDTQVT KDIGDAIESL 
EYEINTLYTS NGQTPFVTLG FGLGTDQLSR KIQQAILHTR IKGLGKDRVT AIFPKLVFSI 
KKGVNFSPED PNYDIKQLAL ECSTKRMYPD ILNYDKLVEL LGDFKAPMGC RSFLPSWKND 
EGQLENNGRC NLGVVTLNVP RIAIEADGDM QQFWDIFEKR MQLLHDALVY RIQRLQDAIP 
DNAPILYKSG AFKNKLTSED TVDSLFTKQR ATISMGYIGL YEAATLFYGP NWEHNPEAKT 
FTLDILREMK RYQVEWTKQY DIWFSIYSTP SESLTDRFCR LDKEKFGFIP DVTDKGYYQN 
SFHYDVRKDV TPFEKLDFEK DYPYYASGGF IHYCEYPKLN HNLKALEAVW DYAYDKVGYL 
GTNIPIDHCY RCGYDGDFET TANGYRCPHC GNTDPKTVDV VKRTCGYLGN PVQRPVIEGR 
QKEICARVKH MKEPRS