Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2128 |
Symbol | |
ID | 3241657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2152253 |
End bp | 2153797 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637168814 |
Product | 1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_189684 |
Protein GI | 57865574 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTAC CTTTCAAAAA TGAACCTGGT ATTGATTTTT CAGTACAGAC AAATGTTGAG CGTTTTAATG AAGAATTAAG GAAAGTAAAA GCGCAACTAG GACAAGATAT ACCACTTGTG ATTAACGGAG AAAAACTTAC TAAAACTGAT ACTTTTAATT CAGTGAATCC TGCGAATACA TCACAGCTCA TTGCGAAAGT GTCTAAAGCA ACGCAAGATG ATATTGAAAA AGCTTTCGAA TCAGCAAATC ATGCGTATCA ATCATGGAAG AAGTGGTCGC ATAAGGACCG TGCAGAATTA CTGTTACGTG TAGCCGCAAT TATCCGTCGT CGAAAAGAGG AAATTTCCGC TATTATGGTT TATGAAGCCG GCAAGCCTTG GGATGAAGCA GTTGGAGATG CAGCTGAGGG TATTGATTTT ATAGAATATT ATGCAAGATC AATGATGGAA CTTGCAGATG GTAAGCCAGT ATTAGACAGA GAAGGTGAAC ATAATCGCTA TTTTTATAAA CCTATTGGTA CAGGCGTGAC AATTCCACCA TGGAATTTTC CATTTGCAAT TATGGCTGGT ACAACCTTAG CCCCTGTTGT TGCAGGTAAC ACTGTATTAT TAAAGCCTGC TGAGGATACA GTTTTGACTG CTTATAAATT AATGGAAATA TTAGAAGAAG CAGGTTTACC CCAAGGTGTT GTAAATTTTG TTCCTGGTGA TCCAAAAGAA ATTGGAGATT ATTTAGTCGA CCATAAAGAT ACACATTTTG TCACATTTAC AGGATCCCGA GCTACAGGTA CACGTATTTA TGAACGTAGT GCTGTAGTGC AAGAAGGACA ACAGTTTTTA AAACGTGTTA TTGCAGAGAT GGGTGGCAAA GATGCGATAG TTGTAGATAA TAATGTAGAT ACAGATTTAG CGGCTGAAGC AATTGTTACA TCTGCTTTTG GTTTCTCTGG TCAAAAATGC TCTGCGTGTT CTCGTGCCAT AGTCCATCAA GACGTACATG ATGAAATATT GGAAAAAGCA ATTCAATTAA CTCAAAAATT AACTTTAGGT AATACTGAAG AGAACACATT TATGGGGCCA GTAATTAATC AAAAACAATT TGATAAAATC AAAAATTATA TTGAAATTGG TAAAAAAGAA GGCAAACTAG AGACTGGTGG TGGAACAGAT GATTCTACCG GTTATTTCAT TGAACCAACG ATTTTCTCCG GACTACAATC TGCGGATCGT ATCATGCAAG AAGAAATTTT TGGACCAGTC GTAGGCTTTA TTAAGGTCAA GGATTTTGAT GAGGCTATTG AAGTAGCTAA TGATACTGAC TATGGTTTGA CAGGCGCTGT AATTACTAAT CATCGTGAAC ATTGGATTAA GGCTGTGAAT GAATTTGATG TAGGTAACCT TTACTTGAAT AGAGGTTGTA CAGCTGCAGT AGTGGGTTAT CATCCATTTG GTGGATTCAA GATGTCTGGT ACAGATGCTA AAACAGGAAG TCCAGATTAC TTACTTAATT TCTTAGAACA AAAAGTTGTT TCTGAAATGT TTTAA
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Protein sequence | MVVPFKNEPG IDFSVQTNVE RFNEELRKVK AQLGQDIPLV INGEKLTKTD TFNSVNPANT SQLIAKVSKA TQDDIEKAFE SANHAYQSWK KWSHKDRAEL LLRVAAIIRR RKEEISAIMV YEAGKPWDEA VGDAAEGIDF IEYYARSMME LADGKPVLDR EGEHNRYFYK PIGTGVTIPP WNFPFAIMAG TTLAPVVAGN TVLLKPAEDT VLTAYKLMEI LEEAGLPQGV VNFVPGDPKE IGDYLVDHKD THFVTFTGSR ATGTRIYERS AVVQEGQQFL KRVIAEMGGK DAIVVDNNVD TDLAAEAIVT SAFGFSGQKC SACSRAIVHQ DVHDEILEKA IQLTQKLTLG NTEENTFMGP VINQKQFDKI KNYIEIGKKE GKLETGGGTD DSTGYFIEPT IFSGLQSADR IMQEEIFGPV VGFIKVKDFD EAIEVANDTD YGLTGAVITN HREHWIKAVN EFDVGNLYLN RGCTAAVVGY HPFGGFKMSG TDAKTGSPDY LLNFLEQKVV SEMF
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