Gene SERP2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2117 
Symbol 
ID3242486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2142373 
End bp2142765 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content31% 
IMG OID637168803 
ProductLrgA family protein 
Protein accessionYP_189673 
Protein GI57865548 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00374978 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CAAAATTTGT CATTAAGTTA ATACTTCAAC TTGCCCTTAT CATGCTTATT 
ACTTTTATAG GCACAGAAGT TCAAAAATTA CTTCATATAC CTCTAGCAGG TAGTATCGTA
GGGCTTATGC TTTTTTTCCT ATTGTTACAA TTTAAAATTG TACCTGAATC ATGGATTAAT
GTAGGAGCAG ACTTTTTACT TAAAACAATG GTTTTCTTCT TTATCCCATC AGTGGTAGGA
ATTATGGATG TTGCATCTAA TATCACGATG AATTATATAT TATTCTTTAT TGTTATTATA
ATTGGTACAT GCCTTGTAGC ACTATCATCA GGTTATATCG CTGAAAAAAT GCTAGAAAAA
AGCAATACAC GTAAAGGAAC TGATCACTCA TGA
 
Protein sequence
MEKAKFVIKL ILQLALIMLI TFIGTEVQKL LHIPLAGSIV GLMLFFLLLQ FKIVPESWIN 
VGADFLLKTM VFFFIPSVVG IMDVASNITM NYILFFIVII IGTCLVALSS GYIAEKMLEK
SNTRKGTDHS