Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2117 |
Symbol | |
ID | 3242486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2142373 |
End bp | 2142765 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168803 |
Product | LrgA family protein |
Protein accession | YP_189673 |
Protein GI | 57865548 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00374978 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG CAAAATTTGT CATTAAGTTA ATACTTCAAC TTGCCCTTAT CATGCTTATT ACTTTTATAG GCACAGAAGT TCAAAAATTA CTTCATATAC CTCTAGCAGG TAGTATCGTA GGGCTTATGC TTTTTTTCCT ATTGTTACAA TTTAAAATTG TACCTGAATC ATGGATTAAT GTAGGAGCAG ACTTTTTACT TAAAACAATG GTTTTCTTCT TTATCCCATC AGTGGTAGGA ATTATGGATG TTGCATCTAA TATCACGATG AATTATATAT TATTCTTTAT TGTTATTATA ATTGGTACAT GCCTTGTAGC ACTATCATCA GGTTATATCG CTGAAAAAAT GCTAGAAAAA AGCAATACAC GTAAAGGAAC TGATCACTCA TGA
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Protein sequence | MEKAKFVIKL ILQLALIMLI TFIGTEVQKL LHIPLAGSIV GLMLFFLLLQ FKIVPESWIN VGADFLLKTM VFFFIPSVVG IMDVASNITM NYILFFIVII IGTCLVALSS GYIAEKMLEK SNTRKGTDHS
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