| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2077 |
|---|
| Symbol | |
|---|
| ID | 3241787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 2103160 |
|---|
| End bp | 2104947 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637168763 |
|---|
| Product | Na+/H+ antiporter, putative |
|---|
| Protein accession | YP_189633 |
|---|
| Protein GI | 57865501 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGG AATTGCCCGT GATGCTAACG ATTGTATTGT TCTTAGCACT AGGCATTTTT
AGTCAATGGT TAGCGAGTAG AATAAAATGG CCATCGATTG TTGTCATGGC CATCGTAGGT
TTGCTTGTAG GACCTATTTT TGGACTAGCA AACCCAAAAG AGGCACTTGG ACCTGAGGCA
TTTAGTTCAA TTGTATCTCT TGCTGTAGCA ATTATATTAT TTGAAGGTAG TAGTAATCTA
GATTTTAGAG AATTAAAAGG CATTTCTAAA GCTGTTATAA GAATTATTAC AATAGGAGCG
GGAATTGCAT GGATTTTAGG AGCAATCGCT TTACATGTCA CTATGAATTT CCCTCTGTCT
ATTTCATTTG TTATCGGAGG ACTATTCCTA ATCACTGGTC CAACCGTGAT TCAACCCTTG
CTGAAGCAAG CGAAAGTAAA AAGAAATGTC GATTCAGTAT TAAGATGGGA AAGTATTATC
TTAGATCCTA TTGGACCTAT TATTGCACTC ACTGCATTTT ATGTATTCCA GATTTTTGAG
GAAGGGATAG GCTTTGTCGT TATTATTCTC TTTATCTTGA AACTCTTAGC TGCAATTTTA
ATAGGTTTTG GTGCAGCCTT TCTATTTAAT TGGCTTATAG GTCAAGATAA AATTCCTCAA
AGTTTAATGC CACCCATTCA GCTTGTATTT ATTCTTTTAA CATTTAGTAT CTGCGATGAG
ATATTATCAG AATCAGGTTT ACTAGCTGTA ACAATTTTTG GCTTAATGAT GGCGCGTAAA
AAACGTCACG ATCTCATCTT TAAAGAATCA GACCACTTTA TAGATAATGC ATCATCTATA
CTTGTGAGTA CTGTATTTAT TTTAATTACG TCTTCTCTCA CTAAAGATGT GTTGCTCAAT
GTGTTATCTT GGCAGCTCAT ACTCTTTAGT TTGGTTATGA TTGTATTAGT AAGACCAATT
TCAGTGCTTC TTTCAACATT AGGTACTGAA ATAACTAAAA AGGAACGTGT AGTAGTAGCA
CTAATGGCGC CTAGAGGTAT TGTGGTTTTA ACAGTGGCAC AATTCTTCTC AAGTTTATTT
ATGGACGATA AAATTCCTAT GGCTCAATAT ATTACACCAG TAACTTTTGG TCTTGTATTT
ATCACTGTAG TCATTTATGG ATTTGGTTTT ACACCTTTAA GTAAACTGTT CGGTGTAGCA
AGTACGGAGC CACCAGGCGT GATCATTGTC GGAGAAAGTG AATTTTCGTT CCATCTTGGT
ATTAATCTAA GGGATCATGG TATACCCGTC ATGATGTTCA ACTTATTTGA AAACACATCA
GAAAAAGCCC ACGAAGCTGG GTTCGAAGTA TTTAAAGGTA ATCTTTTATC TAGCAATGAT
AGAATTTATT CTGATTTATT ACGTTATAAT AAATGTATTT TGATGACACA ATCGTTTATC
TTTAACAGTT TAGCATTTAA TGAATTGGTG CCTGAATTTG GCTTGAATAA TGTAGATATG
ATGCCAGTAT CTTTTAATGA TGAGCAAGCA CGAAACAATT TAAATGGTCC AATCAGAAAT
CATATATTAT TTGATGAAAA TCATACCCCA CGTTGGTTTA ATCAATTTAT TACACAACAT
AATATTGTTG AAGTACCGGC AGAAGATTAT GAAAAAATTA CAGAAAATGA TATGTTAATC
TATCATATCA ATGAAGATAA AGAAGTGACG TTTAAACGAA GCAATAGAGA TATACCTGAA
CATGAAACAG GTGTTTATGG TATTTTAAAA AATGCTTATT TAACTTAA
|
|---|
| Protein sequence | MSLELPVMLT IVLFLALGIF SQWLASRIKW PSIVVMAIVG LLVGPIFGLA NPKEALGPEA
FSSIVSLAVA IILFEGSSNL DFRELKGISK AVIRIITIGA GIAWILGAIA LHVTMNFPLS
ISFVIGGLFL ITGPTVIQPL LKQAKVKRNV DSVLRWESII LDPIGPIIAL TAFYVFQIFE
EGIGFVVIIL FILKLLAAIL IGFGAAFLFN WLIGQDKIPQ SLMPPIQLVF ILLTFSICDE
ILSESGLLAV TIFGLMMARK KRHDLIFKES DHFIDNASSI LVSTVFILIT SSLTKDVLLN
VLSWQLILFS LVMIVLVRPI SVLLSTLGTE ITKKERVVVA LMAPRGIVVL TVAQFFSSLF
MDDKIPMAQY ITPVTFGLVF ITVVIYGFGF TPLSKLFGVA STEPPGVIIV GESEFSFHLG
INLRDHGIPV MMFNLFENTS EKAHEAGFEV FKGNLLSSND RIYSDLLRYN KCILMTQSFI
FNSLAFNELV PEFGLNNVDM MPVSFNDEQA RNNLNGPIRN HILFDENHTP RWFNQFITQH
NIVEVPAEDY EKITENDMLI YHINEDKEVT FKRSNRDIPE HETGVYGILK NAYLT
|
|---|
| |