| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2025 |
|---|
| Symbol | lytR |
|---|
| ID | 3242281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 2046131 |
|---|
| End bp | 2046889 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637168711 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_189581 |
|---|
| Protein GI | 57865397 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGT TAATCGTTGA TGATGAACCA CTTGCAAGAA ATGAATTACA ATATCTTTTA
AATCTTAATG ATGCTATAGA TGAAATTGAA GAAGCAGAAA ACATAGAAGA AACATTGGAG
AAGTTACTCT ACAACACATT TGACTTAATA TTCTTAGATA TAAATTTAAT GGATGAAAGT
GGTATTGATT TAGCTCAAAA AATTAATAAA ATGAAGCGAT CACCACATAT TATCTTTGCA
ACCGCTCACG AGAAATTTGC AGTCAAAGCC TTTGAATTAA ATGCAACCGA TTATATATTA
AAACCTTTTG AAAAAGAACG TATTAATCAA GCTGTAAATA AAGTTGACAT GGCTAAAGAT
AAACCAAAAA ACAAAGATAA AACTATCACA CCTAAATATA TTGATTATAG TGATGATGAG
CGCGCTCAAA CACATGTACT TCCAATTGAA GTGGATGAAC GTATTCACAT CTTAAATTTC
ACAGACATTA TCGCATTATC TGTTAATAAT GGGATTACAA CGATAGATAC AACAAAACAA
AGTTATGAAA CGACCGAAAC ACTTAATCAT TACGAGAAAA AACTACCTTC CTCTCTATTT
ATTAAAATAC ATCGCGCTAC TATCGTTAAT AAAGAACATA TCCAAACAAT AGAGCATTGG
TTTAATTATA CGTATCAGCT GACGTTAACA CATGAATTTA AATATCAAGT TAGTCGTTCT
TATATGAAGA CTTTTAAACA ACAACTCGGT CTTCAATAA
|
|---|
| Protein sequence | MKALIVDDEP LARNELQYLL NLNDAIDEIE EAENIEETLE KLLYNTFDLI FLDINLMDES
GIDLAQKINK MKRSPHIIFA TAHEKFAVKA FELNATDYIL KPFEKERINQ AVNKVDMAKD
KPKNKDKTIT PKYIDYSDDE RAQTHVLPIE VDERIHILNF TDIIALSVNN GITTIDTTKQ
SYETTETLNH YEKKLPSSLF IKIHRATIVN KEHIQTIEHW FNYTYQLTLT HEFKYQVSRS
YMKTFKQQLG LQ
|
|---|
| |