Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2024 |
Symbol | lytS |
ID | 3242280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 2044375 |
End bp | 2046150 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168710 |
Product | sensor histidine kinase LytS |
Protein accession | YP_189580 |
Protein GI | 57865396 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAATT TATTTATTTT ATTACTTGAA CGCGTGGGAT TAATTATTTT ACTCGCATAT ATACTCATGA ATATTAATCA TTTTAAAACA ATGATGAGCG AACGTGACAA ATGGCGTTCA AAATTCCAAC TAATCATTAT TTTTGGTATA TTCTCTATGA TTTCAAATTT TACAGGAATT GAAATAGAAA ATGGCCATAT CGTATCTGGT GATATTTATT ACCACTTAAG CAAAGACGCC TCAATGGCCA ATACCCGTGT ATTAACAATC GGTGTTTCTG GTCTAATAGG TGGACCGTGG GTAGCTATAA TTGTAGGCAT TATTTCAGGA TTATGTCGTT TATATATTGG CGGGGCTGAC GCATATACCT ATCTTATTTC ATCCATAGTT ATCGCTATCA TATCTGGTTA CTTTGGTCAT CAAACAATAA AACAAAATAC ATATCCGTCC ATTAAAAAAG GTGCTATTAT CGGTGCAATA ACTGAAATTA TTCAAATGGG CTGTATATTA TTATTTACAA ATAACCTACA TCACGCAATT ACATTAGTCA GTTTTATAGC ACTACCGATG ATTATCATTA ATAGTTTAGG TACAGCCATA TTTTTAACCA TCATTTTGTC GACCATCAAG CAAGAAGAAC AAATGCGTGC AGTCCAGACG CATGATGTAT TACAACTCGC TAACGAAACA CTACCTTACT TTCGATCTGG ACTTAATGAA AAATCAGCCC AACAAGCTGC TGAAATTATT TTAAAATTAA TGCAAGTGTC GGCGGTCGCT ATTACAAATA AAAAAGATAT TTTAACACAT ATTGGTGCAG GCAGTGACCA TCACGTAGCA CGTAAAGAGA TAATTACTGA TTTATCTAAA GAAGTGATTC AATCTGGAAA ATTAAAAGTC GCTCATACGA GAGAAGGAAT TGGATGTCAC CATCCTAATT GCCCTCTTGA AGGAGCCATT GTCGTCCCTC TTTATATACA TAATGAAGTC GCAGGGACTT TAAAATTTTA TTTCACAGAT AACAATATTA TTTCAACTTC AGACCAACAG CTCGCAAAAG GTCTCGCCAA TATATTTTCT TCACAACTAG AACTAGGTCA AGCTGAAATG CAGGGACAAT TGTTGAAAGA CGCTGAAATT AAATCATTAC AAGCACAAGT CAATCCACAT TTCTTTTTTA ATGCTATTAA CACTATATCA GCACTAGTAA GAATTGATAG CGAAAAAGCA CGACGTTTAC TGATTCAACT CAGTCAGTTC TTCCGCTCTA ATCTTAATGG TGCACGTAAT AATACGATTA CTTTACAAAA GGAATTACAA CAAGTAGCAG CATATTTATC CTTAGAGCAA GCGCGCTATC CAAATAGATT TAACATACAC TATCGAATTG ATGATCAGTG TCAAGATGCG CTCATCCCAC CTTTTATAAT TCAAATATTA GTGGAAAATT CTATTAAACA TGCATTTAAA AATCGTAAAA AGAATAATCA TATTGATGTG GATGTTAGCA TGAAGCAAGA CTACTTAAGT ATATCTGTTC AAGATAATGG TCAAGGCATA CCAGCTGATC AATTAGATAC TATTGGATAT ACGACAGTAA CGTCTACCAC TGGTACTGGT AATGCCTTAG TCAATCTTAA TAAAAGACTT ACTGGACTAT TTGGAACAAC ATCGGCACTG AACATTCAAT CTTCTCAATC AGGCACGACT GTAAGTTGTT TAATTCCATA TAAATCTTCT AAGGAGGAAC ACTTTAATGA AAGCGTTAAT CGTTGA
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Protein sequence | MLNLFILLLE RVGLIILLAY ILMNINHFKT MMSERDKWRS KFQLIIIFGI FSMISNFTGI EIENGHIVSG DIYYHLSKDA SMANTRVLTI GVSGLIGGPW VAIIVGIISG LCRLYIGGAD AYTYLISSIV IAIISGYFGH QTIKQNTYPS IKKGAIIGAI TEIIQMGCIL LFTNNLHHAI TLVSFIALPM IIINSLGTAI FLTIILSTIK QEEQMRAVQT HDVLQLANET LPYFRSGLNE KSAQQAAEII LKLMQVSAVA ITNKKDILTH IGAGSDHHVA RKEIITDLSK EVIQSGKLKV AHTREGIGCH HPNCPLEGAI VVPLYIHNEV AGTLKFYFTD NNIISTSDQQ LAKGLANIFS SQLELGQAEM QGQLLKDAEI KSLQAQVNPH FFFNAINTIS ALVRIDSEKA RRLLIQLSQF FRSNLNGARN NTITLQKELQ QVAAYLSLEQ ARYPNRFNIH YRIDDQCQDA LIPPFIIQIL VENSIKHAFK NRKKNNHIDV DVSMKQDYLS ISVQDNGQGI PADQLDTIGY TTVTSTTGTG NALVNLNKRL TGLFGTTSAL NIQSSQSGTT VSCLIPYKSS KEEHFNESVN R
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